| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4095 |
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| Symbol | |
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| ID | 5706522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4654903 |
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| End bp | 4655709 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641273521 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001538876 |
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| Protein GI | 159039623 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.561462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00330993 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCCGACCG ATACGCAGGC CCGGGAACGG GACGATCAGG ACGTGCGGCG GCTCGACCGC
CTGCTGGATG GTCCGCCTTG GTCAGCCGTG ACGTCGGCGG CCCGGGTGTC GGTCGAGCAC
CTGGGCGGAA GTGAATTTGT TGGCGAGCGG GTACACGTAT CCTCGGCGGG GAAACATCCG
ATCCGAGGGG ATGTGCGGTT GACCACTGAG AAGACGGACG AGCGCAGGGC CCGCTTCGAG
CGGGACGCGA TGCCCTTCGT CGACCAGCTC TACGCTGCTG GCCTGCGGAT GACCCGCAAT
CCGGCCGATG CCGAGGACCT GGTCCAGGAG ACGTACCTGA AGGCGTACGC GGCCTTCCAC
CAGTTCGAGC AGGGCACCAA TCTGAAGGCT TGGCTGTATC GAATCCTGAC CAATACCTAC
ATCAACTCCT ACCGCCGGCG GCAGCGGCAG CCGATTCAGG CGCCGACCGA GGAGATCACC
GACTGGCAGC TCGCCGAGGC CGAGTCGCAC ACCTCCAGTG GGCTGCGTTC GGCTGAGACG
GAGGCGCTGG ACCGGCTGCC GGACAGTGAC ATCAAGCAGG CGCTCCAGCA GCTACCGGAG
GAGTTCCGGC TGGCCGTCTA CCTCACCGAT GTCGAGGGCT TCTCCTACAA GGAGGTCGCC
GAGATCATGG GTACGCCGAT CGGCACGGTG ATGTCGCGGC TGCACCGTGG TCGTCGTAAT
CTGCGCAAAC TGCTGGAGCA GTACGCGGCC GAGCGGGGCT TCACCTCCGC GTCGTCGGCC
AAGGGTTCGA CTGGCCGGGA GGTGTGA
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| Protein sequence | MPTDTQARER DDQDVRRLDR LLDGPPWSAV TSAARVSVEH LGGSEFVGER VHVSSAGKHP
IRGDVRLTTE KTDERRARFE RDAMPFVDQL YAAGLRMTRN PADAEDLVQE TYLKAYAAFH
QFEQGTNLKA WLYRILTNTY INSYRRRQRQ PIQAPTEEIT DWQLAEAESH TSSGLRSAET
EALDRLPDSD IKQALQQLPE EFRLAVYLTD VEGFSYKEVA EIMGTPIGTV MSRLHRGRRN
LRKLLEQYAA ERGFTSASSA KGSTGREV
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