Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4091 |
Symbol | |
ID | 5704744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4652770 |
End bp | 4653438 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641273517 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001538872 |
Protein GI | 159039619 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0267897 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGTGC GGGAGAGCAC AGGCGGCACA CGGGAACGGA TCAAGACCGT CGCCTTGGAG CTTTTCACCG AGCAGGGATA CGAGAAGACC TCGCTCCGGG AGATCGCAGA GCGGCTCGAC GTGACGAAAG CTGCGCTCTA CTACCACTTC AAGAGCAAGG ACGAAATCGT CAGCAGCTTC GTCGAGGACC GCATCGACCA GATGGACGAC CTCGTCGCCT GGGCCGAGAC GCAACCAGCC ACGCTGGCCA CCCGGCGAGC CGTCCTCGGC CGGTACGCGG ACACCATGTG CTCCGGCCGA CAGCCGTCGG TGATGCGCTT CTTCGAACAG AACCAGACGG CATTGCGGAG TCTCGCCGCC GGCCAGCGGA TGCGGGAGCG GATGCTCCGA CTGGCCAACG TGCTCTGCGG CGAGGATCCC TCACCCGAGG CCCAACTGCG GGCCGTCCTC GCGCTCTTCG CTGTGCACAG CAGTTGGTTC GGGGTGCGGG CACCGAACCT CTCCGACGCC GAGCGAAAGG AGATCGCCCT CAGGGTGGCC GACGAGTTGC TCGCCGCCAT CGGCCCGTGC CCGGCCGACA ACCCCGCTGA CCCGGCACCG CGGGCTCGTC GCCCACCCCT GCCCCCACCG AGCCGGATGG GGAGGCCGAC CGGCTCAGCC GGCCAGTGA
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Protein sequence | MMVRESTGGT RERIKTVALE LFTEQGYEKT SLREIAERLD VTKAALYYHF KSKDEIVSSF VEDRIDQMDD LVAWAETQPA TLATRRAVLG RYADTMCSGR QPSVMRFFEQ NQTALRSLAA GQRMRERMLR LANVLCGEDP SPEAQLRAVL ALFAVHSSWF GVRAPNLSDA ERKEIALRVA DELLAAIGPC PADNPADPAP RARRPPLPPP SRMGRPTGSA GQ
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