Gene Sare_4088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4088 
Symbol 
ID5704741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4648049 
End bp4649080 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content74% 
IMG OID641273514 
Productglutamine--fructose-6-phosphate transaminase (isomerizing) 
Protein accessionYP_001538869 
Protein GI159039616 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.062951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0839689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCG ACATCGACGA ACAACCGGCA GCGTTCGCGC GCCTGCTCAC CACCGAGCAC 
GCCGGGGCGA TCGCCCAGGT TGCCGCCGCC ATCGCCGAGC ACGGACCGCG GCACGTGGTG
TTCACTGCCC GAGGCACCTC AGACCACGCC GCGCTCTACG GCGCCTACCT GACCGAGATT
CGGCTTGGCC TGCCCGCCGG GCTCGCCTCG CCCAGCTCCG TCACCGCGTA CGGCGCCCGC
CCGGACCTCT CCGCCGCGCT CGTCGTCGGA GTGAGCCAGA GCGGCGGATC TCCGGACCTC
ACCGAGGTGC TGCGGGCCGC CCGTGACTCC GGCGCGCTCA CCCTCGCGGT TACCAACGCA
CCCGACTCGC CACTGGCCGA CGTGGCGGAG CTCAGTGTGG ACATCGCCGC CGGGCACGAA
CGGGCGGTGG CCGCTACCAA GACCTACACC GCCGAACTGC TCGCGCTGCT CATGCTGGTG
GAGGGCATCC GGGCCGGCGA CGGGGCGCTA CCGGCCGACG AGCGGGCGGC CCTCGACCTG
TTGCCCGAAC TCGCCGCGCG TACCCTCGCC GACGAGACGC CCGCCCAGCT CGCCCCCCGG
TACCGATTCG CCGCGCAGCT GGTCACGACC GGCCGGGGGT ACGCGTATCC GACCGCGCGG
GAAGCCGCGC TGAAGCTCAT GGAGACCTCG TACCTGCCGG CGCTCGCCTT CTCCGGTGCC
GACCTTCTGC ACGGCCCGCT CGCCATGACC GATCCGGATG TGCCGGTGCT CGCGGTGGTC
GGCTCCGGCC CCGGCGGCCG GGCGATGGGG GAGGTGCTGC CACGGCTCGG CGAGCGCCGC
GCCGAGGTGG TGGTGGTGGG GTCGGCGGAC GTGCCCGCCA CGACGCGGAT CGCCGTTCCC
GAGGTCGACG AGCGGTACGC CCCGCTGCTG GACATCCTGC CGCTGCAACG CCTGGCGTTG
GCGCTCGCGC TGGCCCGGGG CGAGGACCCG GACGCACCCC GTGGTCTGAG GAAGGTCACC
GCGACGATGT GA
 
Protein sequence
MAADIDEQPA AFARLLTTEH AGAIAQVAAA IAEHGPRHVV FTARGTSDHA ALYGAYLTEI 
RLGLPAGLAS PSSVTAYGAR PDLSAALVVG VSQSGGSPDL TEVLRAARDS GALTLAVTNA
PDSPLADVAE LSVDIAAGHE RAVAATKTYT AELLALLMLV EGIRAGDGAL PADERAALDL
LPELAARTLA DETPAQLAPR YRFAAQLVTT GRGYAYPTAR EAALKLMETS YLPALAFSGA
DLLHGPLAMT DPDVPVLAVV GSGPGGRAMG EVLPRLGERR AEVVVVGSAD VPATTRIAVP
EVDERYAPLL DILPLQRLAL ALALARGEDP DAPRGLRKVT ATM