Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4070 |
Symbol | kgd |
ID | 5705365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4627788 |
End bp | 4631501 |
Gene Length | 3714 bp |
Protein Length | 1237 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641273496 |
Product | alpha-ketoglutarate decarboxylase |
Protein accession | YP_001538851 |
Protein GI | 159039598 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.102403 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGACCC AGCAGACCTC GCAGGAGAAC CCACTGGCGG GTTTCGGCCC GAACGAGTGG ATCGTCGAGG AGATGTACCA GCGCTACCTC ACCGATCCCA CCAGCGTCGA CCCGGCCTGG CACGACTTCT TCGCCGACTA CCGGCCCGCT CCGGGCGCGG GTGGAACGCG CGGCGAGCAG CCCGCCGCAC CGGAGGGCGA CGGCCGACCT GAACCTTCCG CCGCCCAGCC CGCTCCGGCA CCGGAGGGCA AGCCCACGCC GACCAAGCCC GCCCCTGCGA AGCCAGCCGC CGCGAAAGCA GCTCCCGCGA AGCCGGCTCC CGCGAAGCCG GCGGCCAAGG AGTCCGCGCC GACCCCGTCC GCCCCGCGAA CCGCACCGCT GCGTGGGGTC GCCGCGAGGA TCGTCCAGAA CATGGACGCG TCGCTGAGCG TGCCGACCGC GACCAGTGTG CGTGCCGTCC CGGCCAAGCT GCTGGTGGAC AACCGCATCG TGATCAACAA CCATCTCGCC CGCGGACGCG GCGGGAAGGT CAGCTTCACC CACCTGGTCG GGTACGCGCT GGTCCGTGCG CTGGCTGTGC ACCCGGAGAT GAACAACTCC TACTCCGTCG TGGACGGCAA GCCGGCGCTG GTCCGCCCCG AGCACGTCAA CCTCGGAATC GCGATCGACC TGGTCAAGCC GGATGGCAGC CGCAACCTGG TGGTGCCCTC CATCAAGGCG TGCGAGCAAC TGGACTTCCG GCAGTTCTGG CAGGCGTACG AGGACGTGGT CCGGCGGGCC CGGAAGAACG AGCTGACCAT GGAGGACCAC GGCGGCACCA CGATCTCGCT GACCAACCCG GGCGGCATCG GCACGGTGCA CTCGATGCCG CGGCTGATGA CTGGCCAGAG CGCGATCATC GGCGTCGGCG CGATGGAGTA CCCGGCGCCC TACCAGGGCA TGAGCGAAGC AACACTTGCC GAGCTGGCGG TCAGCAAGGT CATCACGCTG ACCAGCACCT ACGATCATCG GATCATTCAG GGCGCCCAGT CCGGGGAGTT CCTGAAGGTG ATGCATGAGC TGCTGCTCGG CGAGCATGGC TTCTACGACC AGATCTTTAC CTCGCTCCGC ATTCCCTACG AGCCGGTGCG CTGGATGCGC GACGTCGCGA TCGACGGCGA AGGCCAGATC AACAAGACCG CGCGGGTGCA CGAGCTGATC CACGCGTACC GGGTGCGCGG CCACCTGATG GCCGACACCG ACCCGCTGGA ATTCAAGATC CGCAAGCACC CGGACCTGGA CGTCCTCCAG CACGGGCTGA CCCTGTGGGA CCTGGACCGT CAGTTCCCGG TCAACGGTTT CGCCGGGCGG CAGCGGATGA AGCTGCGCGA TGTCCTCGGG GTGCTACGCG ACACGTACTG CCGTCGGGTC GGCATCGAGT ACATGCACAT CCAGGATCCG GAGGAACGGC GCTGGATCCA ACAGCGGGTC GAGCGCAAGT ACGAGAAGCC TGCCGTCGAC GAGCAGAAGC ACGTACTCAA CCGGCTCAAC GCCGCGGAGG CATTCGAGAC CTTCCTACAG ACCAAGTACG TCGGCCAGAA GCGGTTCTCC CTGGAGGGGG GCGAGTCGCT GATCCCGCTG CTCGGCGAGG TGTTGGAGGC ATCCGCCGAG GGTGGACTGG ACGAGGTCGT CATCGGTATG GCGCACCGGG GTCGACTCAA CGTGCTGGCC AACATCGTCG GCAAGCCGTA CGAGAAAATC TTCTCCGAGT TCGAGGGGCA TCTGGACCCG CGGTCCACGC AGGGATCTGG CGACGTCAAG TACCACCTCG GGCAGAACGG CAAGTTCACC ACCCCGAACG GCGAGCACTC GGTCAAGGTC TCGGTGGTGG CGAACCCGTC ACACCTGGAG GCCGTTGACC CGGTGCTGGA GGGCATCGTC CGGGCCAAGC AGGACCGGAT CGACCTCAAG CTGGAGGGCT ACACCGTGCT ACCGCTGGCG GTACACGGTG ACGCGGCCTT CGCCGGCCAG GGTGTCGTCG CCGAGACGCT GAATCTGTCC CAGCTGCGCG GCTACCGCAC CGGCGGCACG GTGCACGTGG TGGTCAACAA CCAGGTCGGC TTCACCACCG CACCGGAGTA CAGTCGCTCC AGTCTCTACA GCACCGACGT GGCCCGGATG ATCCAGGCAC CGATCTTCCA CGTCAACGGC GACGACCCGG AGGCCGTGGT GCGGGTCGCC CAGCTGGCCT TCGAGTACCG GCAGACGTTC AACAAGGACG TCGTGATCGA TCTGGTCTGC TACCGGCGAC GTGGGCACAA CGAGGGCGAC GACCCGTCGA TGTCGAACCC TGAGATGTAC CGGATCATCG ACTCGAAGCG GTCGGTCCGC AAGCTGTACA CGGAGGAGCT GATCGGGCGG GGCGACATCA CCGTGGAGGA CGCGGAGGAG CTGCTGCGCG ACTACCAGGC GCAGCTGGAG CGGGTGTTCA AGGCCACCAG GGACGCCGCC ACCACACCGC GTCAGCTCAG CCGCCCGAAG CGGGAGGATG AGCCGGAGCC ACCGGTGGAC ACCGCGACGG ACGCGGCCGT CATCAGGGCG ATCGGCGAGG CGCACGTCAA CCTGCCGGAA GGCTTCACCC CGCACAAGCG GATCCAGCAG TTGCTCGACC GGCGGGCCAA GATGGCCGCC GAGGGCAACA TCGACTGGGG CTTCGGCGAG ATCATCGCGT TCGGTGCACT GCTACACGAC GGGGTCACCA TCCGGCTCGC CGGTCAGGAC TCGCGCCGCG GCACGTTCGT GCAGCGACAC GCGTCCGTCG TGGACGCGGA GACGGGCGAC GATCACCTGC CGCTGGAGTC ACTCACCGCC GATGGCGAGC GGTCCCGGTT CTTCGTGCAC GACTCGCTGC TGTCCGAGTA CGCGGCGATG GGGTTCGAAT ACGGCTACTC GGTGGAGAAC CTCAACGCGC TGGTCTGCTG GGAGGCCCAG TTCGGTGACT TCGTCAACGG CGCCCAGACG GTGATCGACG AGTTCATCTC CTCCGGTGAG GTCAAGTGGG GCCAGCGCTC CGCGATCACG CTGCTGCTGC CGCACGGCCA CGAAGGCCAG GGCCCCGACC ACACCTCCGG CCGCCCAGAG CGGTTCCTCC AGCTCTGCGC CGAGGACAAC ATGCGGGTGG TTATTCCGAC CACGCCGGCC AACTACTTCC ACCTGCTGCG CCGCCAGGCC CTGTCACCGA AGCGCAAGCC CCTCGTGGTG TTCACGCCCA AGTCCCTGCT GCGGCACCGA CTCTGCGTAT CGGACGTCCA GGACTTCACC ACCGGTACCT TCCGGCCGGT GCTACCCGAC AGCGGCGCCC CGGCGCCGGA GCAGGTGAAG CGGGTGCTGC TCTGCTCGGG CAAGGTCTAC TACGACCTGT TCCAGGCCCG GCAGGAGCGC GGCGTCACCG ATACCGCGAT CGTCCGGGTC GAGCAGCTCT ACCCGATGCC GATCGAGGAG ATCCGGGCCG CACTCGCGGC CTACCCGAAC GCCGTGGACT TCGCCTGGAC CCAGGAGGAG CCAAGCAACC AGGGCGCTTG GTCGTTCGTC GCACTCAACA TGCTGGAGCA CCTGGACGGG GTCCGGTTGC GGCGCATCTC CCGCCCTGCC GCAGCCGCCC CGGCGGTCGG CTCGGCCAAG ATGCACGACG TCGAGCTGTC CGCCCTCATC GAGGCGGCGC TCCCCCGCCC GTAG
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Protein sequence | MSTQQTSQEN PLAGFGPNEW IVEEMYQRYL TDPTSVDPAW HDFFADYRPA PGAGGTRGEQ PAAPEGDGRP EPSAAQPAPA PEGKPTPTKP APAKPAAAKA APAKPAPAKP AAKESAPTPS APRTAPLRGV AARIVQNMDA SLSVPTATSV RAVPAKLLVD NRIVINNHLA RGRGGKVSFT HLVGYALVRA LAVHPEMNNS YSVVDGKPAL VRPEHVNLGI AIDLVKPDGS RNLVVPSIKA CEQLDFRQFW QAYEDVVRRA RKNELTMEDH GGTTISLTNP GGIGTVHSMP RLMTGQSAII GVGAMEYPAP YQGMSEATLA ELAVSKVITL TSTYDHRIIQ GAQSGEFLKV MHELLLGEHG FYDQIFTSLR IPYEPVRWMR DVAIDGEGQI NKTARVHELI HAYRVRGHLM ADTDPLEFKI RKHPDLDVLQ HGLTLWDLDR QFPVNGFAGR QRMKLRDVLG VLRDTYCRRV GIEYMHIQDP EERRWIQQRV ERKYEKPAVD EQKHVLNRLN AAEAFETFLQ TKYVGQKRFS LEGGESLIPL LGEVLEASAE GGLDEVVIGM AHRGRLNVLA NIVGKPYEKI FSEFEGHLDP RSTQGSGDVK YHLGQNGKFT TPNGEHSVKV SVVANPSHLE AVDPVLEGIV RAKQDRIDLK LEGYTVLPLA VHGDAAFAGQ GVVAETLNLS QLRGYRTGGT VHVVVNNQVG FTTAPEYSRS SLYSTDVARM IQAPIFHVNG DDPEAVVRVA QLAFEYRQTF NKDVVIDLVC YRRRGHNEGD DPSMSNPEMY RIIDSKRSVR KLYTEELIGR GDITVEDAEE LLRDYQAQLE RVFKATRDAA TTPRQLSRPK REDEPEPPVD TATDAAVIRA IGEAHVNLPE GFTPHKRIQQ LLDRRAKMAA EGNIDWGFGE IIAFGALLHD GVTIRLAGQD SRRGTFVQRH ASVVDAETGD DHLPLESLTA DGERSRFFVH DSLLSEYAAM GFEYGYSVEN LNALVCWEAQ FGDFVNGAQT VIDEFISSGE VKWGQRSAIT LLLPHGHEGQ GPDHTSGRPE RFLQLCAEDN MRVVIPTTPA NYFHLLRRQA LSPKRKPLVV FTPKSLLRHR LCVSDVQDFT TGTFRPVLPD SGAPAPEQVK RVLLCSGKVY YDLFQARQER GVTDTAIVRV EQLYPMPIEE IRAALAAYPN AVDFAWTQEE PSNQGAWSFV ALNMLEHLDG VRLRRISRPA AAAPAVGSAK MHDVELSALI EAALPRP
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