Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4066 |
Symbol | |
ID | 5704149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4623975 |
End bp | 4624745 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641273492 |
Product | hypothetical protein |
Protein accession | YP_001538847 |
Protein GI | 159039594 |
COG category | [R] General function prediction only |
COG ID | [COG3176] Putative hemolysin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.311734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0821052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTTC TACCCGCCGC GCTGACCACC AGCGGATACA CCCTGTCGAT CGCCGACGAC CCGGGTCACG TCGTGGCCGC GCAGCGGCTG CGGCACGAGG TGTTCGCCAC CGAGCTGGGC GCCACCCTCC GCCCGGAGGC CGACGGCCTC GATGTGGACG ACTTCGACCC ACACTGCGAT CACCTGATCG TGCGTCAGCA CCGTGACGCT GCCGTCGTCG GGACGTATCG GCTGCTGCCG CCGGGCCGGG TGCAGCGCCG GTACGCCGAC GGAGAGTTCG ACCTGGCGGC CCTTGACCCG CTCCGGGACG ACCTGGTCGA GGCTGGTCGG TCCTGCGTGC ACCCCGAGCA CCGGACCGGT GCCGTCCTCA CCCTCATGTG GGCCGGCATT GCCCGCTACC TGCACCTGCG CGGATCCCGG TGGCTCGGTG GCTGCGCCTC GGTGCCGGTC GCCGACGGTG GGCGCGCTGC CGCCGAAGTG TGGGCTCTCG CCAGGGCCCG GCATCTGGCC CCGCCGCCGC TGCGGGTGCG CCCGCTGCGC CCTTGGTTCG CCGAACCGGG CGTGCCGCCG GCGGCAACCG CGGTCGGCGG GACGGTGGCC CGGGCGCTAC TGCCGCCGCT GCTTCGCGGC TACCTCCGGC TCGGCGCCTG GGTCTGCGGC GAGCCGGCGT ACGATCCGGA TTTCGGGGTC GTCGACTTCT ACCTGCTCTT CTCGCTGGAC CGGATGAACC CGCGCTACCT GCGGCACTTC CTGGGTGGAG TGCAGCGGTG A
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Protein sequence | MAVLPAALTT SGYTLSIADD PGHVVAAQRL RHEVFATELG ATLRPEADGL DVDDFDPHCD HLIVRQHRDA AVVGTYRLLP PGRVQRRYAD GEFDLAALDP LRDDLVEAGR SCVHPEHRTG AVLTLMWAGI ARYLHLRGSR WLGGCASVPV ADGGRAAAEV WALARARHLA PPPLRVRPLR PWFAEPGVPP AATAVGGTVA RALLPPLLRG YLRLGAWVCG EPAYDPDFGV VDFYLLFSLD RMNPRYLRHF LGGVQR
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