| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4065 |
|---|
| Symbol | |
|---|
| ID | 5704148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4623073 |
|---|
| End bp | 4623978 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641273491 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_001538846 |
|---|
| Protein GI | 159039593 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.454479 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0821052 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCGTG GCGGCCACGA CCTCTGGCGT CCGACGTCGG GATGCGGCCC GGCGTGCCTG
CCGGTCCCCG GTCAGGTGCC GGCGGTCTCC GCAGCCCGGT GGACTGGTCG GCTGGCTGCC
GGGCTTGGCA TGCTGCTCGT TGGGGTCGGC CTGGCGGCAC TGCTCCCACT GCTGCCGGCG
CGTGAGCAGC GAACCATGAT CCAAGGCTGG GCTCGGGCCA CTGCCCGGGC CCTCGGCGTA
CGCCTGGTGG CTCGGGGCCG GCTGCCGCGG CGGCCCGCGC TACTGGTCGC CAACCATGCT
TCCTGGCTGG ACGCTCTGGC AGTGCTGGCC GTGGCGCCGG CCTGCCTGGT CGCCAAGAGT
GACATCCGCG CCTGGCCGGT CATCGGGCGA CTCGCCGGGG CTGCCGGGGC CGTCTTCGTC
GACCGGACGC GCCCCCGTGA CCTGCCAGGC GCGGTGGCGC GGATGGCCGC CGCGTTGCGT
GCCGGTCGGC CCGTCGCGGT GTTTCCGGAG GGAACCACCT GGTGTGGGAG CACGACGGGC
TGCCGCCCGG TTGGCGGGTT CCGGCCGGCC GCGTTCCAGG CGGCGATCGA CGTGGGCGTG
CCGGTGGTGC CGCTGCGGCT CGGCTACCGG TGCGCGACGA CCGAGGCCAC CACGACTGCA
GCGTTCCTCG GCGACGAGAC CCTGTGGCGG TCGCTGCGGC GGGTGTTGGC CGCCAGGGAA
CTCGAAGTGT CGGTGGTGGC CACCGCGGCC CTGCACCCGA CCCGCGACAC CGACCGCGGG
GCGCTGGCTC GGGCTGCCGA GGCAGCGGTA CGTCTGCCGC CAGCCCGGCC GCCGCGTCCG
CCAGTGCCGG CCCCGCGCCC GGTCCGGCCG ATCCTCCCGG GCGGGACACT CGACCTGGCC
ACATGA
|
|---|
| Protein sequence | MTRGGHDLWR PTSGCGPACL PVPGQVPAVS AARWTGRLAA GLGMLLVGVG LAALLPLLPA
REQRTMIQGW ARATARALGV RLVARGRLPR RPALLVANHA SWLDALAVLA VAPACLVAKS
DIRAWPVIGR LAGAAGAVFV DRTRPRDLPG AVARMAAALR AGRPVAVFPE GTTWCGSTTG
CRPVGGFRPA AFQAAIDVGV PVVPLRLGYR CATTEATTTA AFLGDETLWR SLRRVLAARE
LEVSVVATAA LHPTRDTDRG ALARAAEAAV RLPPARPPRP PVPAPRPVRP ILPGGTLDLA
T
|
|---|
| |