Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4041 |
Symbol | |
ID | 5705022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4598103 |
End bp | 4598651 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641273467 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001538822 |
Protein GI | 159039569 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.449289 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0505107 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGGG TAGCGCCCGA GACGCATGAC GAAATCCTCG CAGCGGCGGG GCGACGGTTC GCGCAGACCG GCTATCGGGG CACGTCGTTG CAGGACATCG CCCGTGACGT GGGCTGTTCC AAGGCGGCGG TGCTCTACCA CTTCGCCAAC AAGGAAGCCA TTCTCACCGG GCTGATGGAC CGGCCGATCG GCCAGTTACG GGAACTCGAC GAGCGCATCG CCGCCACGAG CAGCCCGGCC GAGGCCCAGC GAGTCGCGGC CGACGGCTTC GTCGACCTGG CCGTCCGCTT CCGGCGCGAG ATCGCGCTCC TTCGCGGTGA GTTCCCGGAT CTGCTCCAGC AACCCGCCTT CTCCTACATC CAGCACGTCC CCGAACGGCT CGTCAGCGCC TTCGCCGGGC ACTCCGACCG CCCGGCTGCC CGGATCGCCG CGCTGGTGGT GCTCGCCGGC ATCGCCGAGA CGTGTGGGGA ATTCGTCGAC ATCCCTGACG CGCAGCTGCG CTCGGCGCTG CTCGCGCTGG TTCACCGGGC ACTCGAGCCG GTCAACTGA
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Protein sequence | MTRVAPETHD EILAAAGRRF AQTGYRGTSL QDIARDVGCS KAAVLYHFAN KEAILTGLMD RPIGQLRELD ERIAATSSPA EAQRVAADGF VDLAVRFRRE IALLRGEFPD LLQQPAFSYI QHVPERLVSA FAGHSDRPAA RIAALVVLAG IAETCGEFVD IPDAQLRSAL LALVHRALEP VN
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