Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4034 |
Symbol | |
ID | 5705014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4590526 |
End bp | 4591938 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641273459 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_001538815 |
Protein GI | 159039562 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.84121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00505776 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTGCGC ACGAGGCCGG TGCCCTGCAC GGGGAGATCG GCAGCCGTGG GCCGGCGTGG CTGCGTGCCC CGCTCGACGT GAACGCCCTG GTGCCGGGGC TGTGGCCGCG CACCGTCAGC CGTGCGGCGG ACGGTGCGCT CGCGGTCGCG GGTTGTTCGG TGCGGGACCT CGCCGCCGAG TTCGGCACGC CGGTCTACGT GTTGGACGAG GAGGACCTGC GGACCCGCTG TCGGGACTTC CGTGCCGCTT TTCCGACCGA GGACGTCTAC TACGCCGGTA AGGCGTTCCT CTGCCGCGCG GTGGTTCGGA TGATCGCCGA GGAGGGCCTG CACCTGGACG TGTGCAGCGG TGGCGAGTTG GCCACCGCGC TGGCGGCCGG GATGCCGCCG GAGCGGATCG GCTTCCATGG CAACAACAAG TCGGTCGCCG AGCTGAGCCG GGCGCTGGAC GCCGGGGTGG GCCGGATCAT CGTCGACTCG TCCCACGAGA TCGACCGACT AACCGGGTTG GCTCGCGAGC GGGGCGTCCG CCCACGGGTA CTGGTGCGGG TCACCGTCGG CGTGGAGGCG CACACCCACG AGTTCATCGC CACCGCACAC GAGGACCAGA AGTTCGGCTT TTCGCTGGCG GGAGGCGCGG CGATCGCCGC CGTACTGCGC ATCCTCGACG AGGACGTGTT GGAGTTACGT GGTCTGCACT CGCACATCGG ATCGCAGATC TTCGACGCGA GCGGCTTCGA GGTCTCCGCC CGCCGGGTGC TGGCGCTCCA GGCGCAGATC CGCGACGCGC GGGGAGTGCA GTTGCCCGAG CTGGACCTGG GTGGCGGCTT CGGCATCGCG TACACGACAC AGGACGACCC GGCCACGCCG GCCGATCTGG CGAAGCGGCT ACGGAAGATC GTCGACGGGG AGTGCGCCGC CGAGCGGCTG GCCGTGCCGC ACCTGTCCAT CGAGCCGGGC CGGGCGATCG TCGGTCCGGC CATGTTCACG CTCTACGAGG TGGGCACGGT CAAGTCCGTG CCGGTCGGCG CCGGTGGGGA CACCGCTGAC GGGCACCGCT GCTATGTGAG CGTCGACGGC GGAATGAGTG ACAACATCCG GACCGCGCTC TACGACGCGT CCTACTCGGC GACGGTGGCC TCCCGGGCGA GCGGTGCCGC GCCGGTGCTC GCCCGCGTGG TGGGAAAGCA TTGTGAGTCC GGGGACATCG TGGTGAAGGA TGAGTTCCTG CCCGCCGACG TGCAGCCCGG AGATCTTGTC GCGGTGCCCG GTACAGGTGC GTACTGCCGG AGCATGGCCA GCAACTACAA CCACGTGCTG CGCCCGCCGG TGGTCGCGGT GCGCGACGGT CAGGCCCGCC TGATCGTCCG CCGGGAAACC GAAGAGGATC TGCTCGCTTT GGATGTGGGA TGA
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Protein sequence | MRAHEAGALH GEIGSRGPAW LRAPLDVNAL VPGLWPRTVS RAADGALAVA GCSVRDLAAE FGTPVYVLDE EDLRTRCRDF RAAFPTEDVY YAGKAFLCRA VVRMIAEEGL HLDVCSGGEL ATALAAGMPP ERIGFHGNNK SVAELSRALD AGVGRIIVDS SHEIDRLTGL ARERGVRPRV LVRVTVGVEA HTHEFIATAH EDQKFGFSLA GGAAIAAVLR ILDEDVLELR GLHSHIGSQI FDASGFEVSA RRVLALQAQI RDARGVQLPE LDLGGGFGIA YTTQDDPATP ADLAKRLRKI VDGECAAERL AVPHLSIEPG RAIVGPAMFT LYEVGTVKSV PVGAGGDTAD GHRCYVSVDG GMSDNIRTAL YDASYSATVA SRASGAAPVL ARVVGKHCES GDIVVKDEFL PADVQPGDLV AVPGTGAYCR SMASNYNHVL RPPVVAVRDG QARLIVRRET EEDLLALDVG
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