| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4028 |
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| Symbol | |
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| ID | 5706432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4579822 |
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| End bp | 4581888 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641273453 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001538809 |
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| Protein GI | 159039556 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0016816 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGCGACA CCACCGACGT GACGTCGGAT GTTTCCAACG TCGCCGGCGA TGCCACGACC
GCTGCTCCCA CCCGTCGTCG GCGTAGCGGC ACGGGTCTGT CGGCGATGCT GCTGCCTGAG
CTTCAGAGCC TGGCTGCGTC GCTCGGCATC TCGGGCACGG CTCGCATGCG TAAGGGTGAG
CTGATCAGCG CGATCACCGA GCGCCAGGGT GGCGGGGCAG CCACCGGAAC CCCTCGACCG
CGGGCCGAGG TCGCGGCTGC TGCCGCGCTC GCCCGCGAGG AGGTCCACGC GGAGGTCCGC
GAGTCGGGCG AGCGGCCGGA GGCCGAGTCA CGTCCTGCGG AGCAGCCAGC CGCTGGTGGG
ACCACCGGCC GGGCTCGGGG CCGGCGTGCC CGTGCGGCCA GCGAGGCCAG TGAGGCCCGT
GTCGAGGCGC GACCAGAGGG CGCCGAGGCC GGCGACCGGG CCGAGCGTGG CGATCGGGCC
GAGCGTGGTG ACCGGGCCGA GCGTGGTGAC CGGGCCGAGC GTGGCGATCG GGCCGAGCGT
GGCGATCGGG CCGAGCGTGG TGACCGGGCC GAGCGTGGCG ATCGGGCCGA GCGTGGCGAT
CGGGCCGAGC GTGGCGATCG GGCCGAGCGT GGCGATCGGG CCGAGCGTGG TGACCGGGCC
GAGCGTGGCG ATCGGGCCGA GCGTGGTGAC CGGGCCGAGC GTGGTGACCG GGCCGAGCGT
GGTGACCGGG CCGAGCGTGG TGACCGGGCC GAGCGTGGCG ATCGGGCCGA GCGTGGTGAC
CGGAACGACC GCGGCCAGCG TGACAATGAC GGCGACGAGG AGAACGAGGG TGGCGGCCGG
CGCGGCCGGC GCAGCCGATT CCGGGACCGT CGTCGTGGCC GTGGCGACCG GGTCGACGGC
GGCGACGGTG GCCGGGAGCC CCAGGTCAGC GAGGACGACG TGCTCGTTCC GGTGGCAGGC
ATCATCGACG TGCTCGACAA CTACGCCTTC GTCCGGACCA CCGGCTACCT GGCCGGTCCG
AACGACGTCT ACGTCTCGAT GTCCCAGATC AAGCGGTACG GCCTGCGGCG CGGTGACGCG
ATCACCGGTG CCGTGCGCGC GGCGCGGGAG GGCGAGCAGC GGCGGGACAA GTACAACCCG
CTCGTTCGGC TGGACACCAT CAACGGGATG GAGCCCGAGG AGGCGAAGCG GCGGCCGGAG
TTCTATCGAC TCACCCCGCT CTACCCGCAG GAGCGGCTGC GGTTGGAGAG CGAGCCGCAC
ATCCTCACCA CCCGGGTGAT CGATCTGGTG ATGCCGATCG GCAAGGGTCA GCGGGCGCTC
ATCGTTTCGC CGCCGAAGGC CGGTAAGACC ATGGTGTTGC AGGCGATCGC GAACGCGATC
ACCCACAACA ACCCGGAGTG CCACCTGATG GTGGTGTTGG TGGACGAGCG CCCAGAAGAG
GTCACCGACA TGCAACGGTC GGTGAAGGGC GAGGTCATCG CGGCGACGTT CGATCGCCCG
CCGCAGGATC ACACCACCGT CGCCGAACTG GCGATCGAGC GGGCGAAGCG GCTGGTCGAG
CTGGGCCACG ACGTGGTCGT GCTGCTCGAC TCGGTGACGC GGCTCGGGCG GTCGTACAAC
CTGGCGGCAC CGGCCAGTGG TCGGATCATG TCGGGTGGTA TCGACTCCAC CGCGCTGTAT
CCACCCAAGC GGTTCCTGGG CGCGGCCCGC AATATCGAAA ACGGCGGCTC GTTGACCATC
CTCGCCACCG CGCTGGTGGA GACCGGGTCG ATGGCGGACA CGGTCATCTT CGAGGAGTTC
AAGGGCACCG GCAACGCGGA GCTGAAGTTG GACCGGAAGA TCGCCGACAA GCGAACCTTC
CCGGCTATCG ACATCCACCC GTCCGGCACG CGTAAGGAGG AGATCCTGCT CGCGCCGGAG
GAACTGGCCA TCGTGCACAA GCTTCGGAAG GTGCTGCACT CGCTGGATTC GCAGGCCGCG
CTGGACCTGT TGCTGGACCG CCTCAAGCAG TCGCGCACCA ACATCGAGTT CCTGATGCAG
ATCGCGAAGT CGACACCGGG GGAGTGA
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| Protein sequence | MSDTTDVTSD VSNVAGDATT AAPTRRRRSG TGLSAMLLPE LQSLAASLGI SGTARMRKGE
LISAITERQG GGAATGTPRP RAEVAAAAAL AREEVHAEVR ESGERPEAES RPAEQPAAGG
TTGRARGRRA RAASEASEAR VEARPEGAEA GDRAERGDRA ERGDRAERGD RAERGDRAER
GDRAERGDRA ERGDRAERGD RAERGDRAER GDRAERGDRA ERGDRAERGD RAERGDRAER
GDRAERGDRA ERGDRAERGD RNDRGQRDND GDEENEGGGR RGRRSRFRDR RRGRGDRVDG
GDGGREPQVS EDDVLVPVAG IIDVLDNYAF VRTTGYLAGP NDVYVSMSQI KRYGLRRGDA
ITGAVRAARE GEQRRDKYNP LVRLDTINGM EPEEAKRRPE FYRLTPLYPQ ERLRLESEPH
ILTTRVIDLV MPIGKGQRAL IVSPPKAGKT MVLQAIANAI THNNPECHLM VVLVDERPEE
VTDMQRSVKG EVIAATFDRP PQDHTTVAEL AIERAKRLVE LGHDVVVLLD SVTRLGRSYN
LAAPASGRIM SGGIDSTALY PPKRFLGAAR NIENGGSLTI LATALVETGS MADTVIFEEF
KGTGNAELKL DRKIADKRTF PAIDIHPSGT RKEEILLAPE ELAIVHKLRK VLHSLDSQAA
LDLLLDRLKQ SRTNIEFLMQ IAKSTPGE
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