| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4023 |
|---|
| Symbol | |
|---|
| ID | 5706427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4574626 |
|---|
| End bp | 4575270 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641273448 |
|---|
| Product | Sua5/YciO/YrdC/YwlC family protein |
|---|
| Protein accession | YP_001538804 |
|---|
| Protein GI | 159039551 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000551399 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTACG ACTGCCGGTC GCCCGCCGAC CGGGACCGCG GCGTCGCGGC AGCCATCGAG
GCGGTGCGGG GCGGCGAGTT GGTCGTCCTG CCGACCGACA CGGTCTATGG GGTGGGGGCG
GACGCGTTCA CCCCGCACGC GGTCAAGGCC CTGCTCGACG CCAAGGGGGG CCGGCCGGTG
CCGCCGCCGG TGCTGATCGG CTCTCGGCGT ACTCTCGACG GCCTGGTCTT CAGGCTGCCC
CGGGCGGCCC GTGACCTGGT GGAGGCGTTC TGGCCGGGTG CGCTGACCAT TGTGGTCGAG
CACTCGCCCA GCCTGCGCTG GGACCTGGGG GAGACGTCGG GCACGGTCGC GGTGCGGATG
CCGTTGCATC CGGTCGCGCT GGAGGTCCTT CGGGAGACTG GCCCGATGGC GGTGGCGTCG
GCGAACACAG CCGGGCTGCC CGCGGCCACC ACCGCCGAGG CGGCCCGCGG GCAGCTCGCC
TACTCGGTAC GCACGTACCT GGAGGCGGGT CCGGCGGTCG ACCCGGTGCC GAGCACGATC
GTGGACCTGA CCGGTGCGGT GCCCCAGTTG GTCCGGGCTG GGGCGATCGG GCTGGACCGG
CTGCGCGATG TGGTGCCGGA CATCGTCGAG AGCCGGGCGG CCTGA
|
|---|
| Protein sequence | MLYDCRSPAD RDRGVAAAIE AVRGGELVVL PTDTVYGVGA DAFTPHAVKA LLDAKGGRPV
PPPVLIGSRR TLDGLVFRLP RAARDLVEAF WPGALTIVVE HSPSLRWDLG ETSGTVAVRM
PLHPVALEVL RETGPMAVAS ANTAGLPAAT TAEAARGQLA YSVRTYLEAG PAVDPVPSTI
VDLTGAVPQL VRAGAIGLDR LRDVVPDIVE SRAA
|
|---|
| |