Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4021 |
Symbol | |
ID | 5706425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4571816 |
End bp | 4573918 |
Gene Length | 2103 bp |
Protein Length | 700 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641273446 |
Product | glycosyl transferase family protein |
Protein accession | YP_001538802 |
Protein GI | 159039549 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000948759 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCCGGC CACCTCTAAA CAAGATCATG ACAGTCCTGC TTGCCGGTCT CCTGGCAGGT CTCGGGCTTG CGGTGGCGGC CCTACCAGCC GCCCTGGTGT ACGGGGTCGG CCTCTCGGCG CTCGCCGCGC CCTACTCGGA ACTGCCGAAC ACCCTGCGGA CGCCGCCGAC GCCCCAGCGG TCGAATCTGT ATGCCAACGA CGGCAGCACG TTGATCACGT CCTTCTACCA GGAGGACCGG GCGGACGTGC CGCTGCACGA GGTGGCCCCG GTGATGCGTC AGGCGATCCT CGCCGCCGAG GACGCCCGCT TCTACCAGCA CCGTGGGGTG GACCTGCGCG GGGTGATCCG GGCGTTCACC GCCAACCAGC GCGGCGGTGA GGTTCGGCAG GGGGCGTCGA CACTGACCAT GCAGTACGTC CGCAACGTGC TGGCCAGCGA CCCGCGCCTG ACCGAACAGC AGCGCCGGGC CGCCACCGAG GTCACCTCCG CGCGCAAGGT GCAGGAGGTG CGGTACGCGC TGGCGTTGGA GCGGGAGCTG AGCAAGGACG AGATCCTCGC CCGCTACCTC AACATCGCGT ACTTCGGGGC CGGGGCGTAC GGGGTGGCCG CGGCGAGCAA GCGCTACTTC ACCAAGTCAC CGGCCGAACT GACCCTGGCC GAGGCAGCGC TGCTCGCCGG CCTGGTCCGT TCCCCACACA CCCACGACCC GCTCAACGGT GACGCCGATG CCGCAGTGTC GCGCCGGGCG TACGTGCTGG ACCAGATGGT GCAGGCCGGG CAGCTCGCGG CCGGCGACGC GGCCCGGGCA GCGGCCGAAC CGCTCAGGCT GCGCCCCAGC GAGACGCCGA ACGACTGCGC GGCGGTGCCA GCAGCGCACA ACGACTGGGG CTTCTTCTGC GACTGGTTCA CCCGTTGGTG GAACTCGCAG GAGGCGTTCG GGTCGACGGT CGACGAGCGG CAGCTGGCCC TGCGGCGCGG CGGCTACTCG ATCGTGGCGT CCCTGGACCC GGCGGTGCAG CAGGCCACGG TCGGGCAGGT GAGCCGGATC TACCCGACGG ACCACCCGCA CGCGCTACCG ACCGCGGTGG TCCAGCCCGG CACCGGGCGG GTACTGGCCA TGGCGGTCAA CCGCACCTAC GGCGTGCAGG AGAACCCGGC CGGGTGGAAG AACCGCCCGA ACACGGTCAA CCAGCTGGTT GCCGGCGGCG GCGCGATTCA GGGTTACCAG GCCGGGAGTA CGTTCAAGCT GTTCACCGTG CTGGCCGCCG TGGAGGCCGG GATGCCGTTG AACACGGTGT TCGACGCACC CGACCGGATC ATCACCCGCT TCCCGAGTGG CGAGGCGAGC TGCGGCGGGA GGTGGTGCCC GCGCAACGCC AGCTCACGGG TTGACGGCGA GCACACCATG TGGAGCGCGT TCGGCCAGTC GGTCAACACG TACTTTGCCT GGTTGACCGA GCGGGTCGGC GCGGATCGGG TGGTGGAGAT GGCCGAGCGG TTGGGCATCG TGTTCCGAGC GGCGAGCGAC GAGCGGCTGG CCCGGCACGG TGCCCGCGAG TGGGGGCCGT TCACATTGGG CGTCTCGGCG ACCACTCCCC TGGACCTGGC GAACGCGTAT GCCACGGTGG CGGCGGATGG GCGGTGGTGC GCGCCGCTAC CGGTGGTCCG GATCACCGAT GCCGCGGGGC GGCCGGTGGC CGCCGCGTCG CCGGACTGCC GACAGGCCGT GGCCCGGGAC GTGGCCCGCG CCGCGGTGGA CGCCGCGCGG TGCCCGGTCG GCGACCGATC GATGTACCAG GGGTGCGAGG GCGGTACCGC GGAGGACCTG CGCGCTCGGC TGGGGCGCCC GGTGGCTGGT AAGACCGGCT CCTCGGAGGG GTACGGCACG GAGTCCATCG TCGCCGCCAC GCCGCAGCTC GCGGTGGCGG CGATCGCTAC CAACCCGGAT GATCCGCAGG ACCCCGTGGG GCACGCGGTG CAGAAGCGGA TGACGACCGC GGTGGCCGAG CTGATGTCGC TCGCCTTGCA GGGCCAGCCG GTCCGCGACT TCGTCCCGCC GAGCGAGGTG ACCGCGTTCG AGACTGCCCG CAGGGGCGAG TAG
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Protein sequence | MTRPPLNKIM TVLLAGLLAG LGLAVAALPA ALVYGVGLSA LAAPYSELPN TLRTPPTPQR SNLYANDGST LITSFYQEDR ADVPLHEVAP VMRQAILAAE DARFYQHRGV DLRGVIRAFT ANQRGGEVRQ GASTLTMQYV RNVLASDPRL TEQQRRAATE VTSARKVQEV RYALALEREL SKDEILARYL NIAYFGAGAY GVAAASKRYF TKSPAELTLA EAALLAGLVR SPHTHDPLNG DADAAVSRRA YVLDQMVQAG QLAAGDAARA AAEPLRLRPS ETPNDCAAVP AAHNDWGFFC DWFTRWWNSQ EAFGSTVDER QLALRRGGYS IVASLDPAVQ QATVGQVSRI YPTDHPHALP TAVVQPGTGR VLAMAVNRTY GVQENPAGWK NRPNTVNQLV AGGGAIQGYQ AGSTFKLFTV LAAVEAGMPL NTVFDAPDRI ITRFPSGEAS CGGRWCPRNA SSRVDGEHTM WSAFGQSVNT YFAWLTERVG ADRVVEMAER LGIVFRAASD ERLARHGARE WGPFTLGVSA TTPLDLANAY ATVAADGRWC APLPVVRITD AAGRPVAAAS PDCRQAVARD VARAAVDAAR CPVGDRSMYQ GCEGGTAEDL RARLGRPVAG KTGSSEGYGT ESIVAATPQL AVAAIATNPD DPQDPVGHAV QKRMTTAVAE LMSLALQGQP VRDFVPPSEV TAFETARRGE
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