Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4004 |
Symbol | |
ID | 5704890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4556839 |
End bp | 4557687 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641273429 |
Product | ABC transporter related |
Protein accession | YP_001538785 |
Protein GI | 159039532 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0853449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000219352 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGAACG AGCTCGCGAT CGTCGCGCGG GGGCTGCGCA AGACGTACGG GGAGAACGTG GCCGTGGCCG GGGTGGACCT GGAGGTCCGC CGGGGCGAGG TGTTCGCCCT CCTCGGCCCG AACGGCGCCG GCAAGACGAC CACCGTGGAG ATCCTGGAGG GATACCGGCG ACGCGACGCC GGCGAGGTCT CGGTGCTCGG CAGCGACCCG GCGGCCCCCG CCGCGGACTG GCGCAACCGG ATCGGCATCG TCCTGCAGGG CCTCGGCGAG TTCGACGAGC TCAGCGTCTC CGAACTGGTC CACCACTTCG CCGGCTTCTA CGCCGACGCC GACGATCCGG AGAAGGTGAT CGCCCGCGTA GGGCTGGCTG GCAAGGCCCG GGCCCGCACC CACACCCTCT CCGGCGGGCA GAAGCGCCGC CTGGACGTGG CGCTCGGCAT CATCGGCCGG CCCGAGCTGC TCTTCCTCGA CGAGCCGACC ACGGGCTTCG ACCCAGAGGC GCGCCGCGAG TTCTGGGACT TGATTCGGGA TCTGGCAGCG GCCGGGACGA CGATCGTGCT GACCACGCAC TACCTCGACG AGGCGGAGGC TCTCGCGGAC CGGGTGGGGG TGATCGCCGA CGGCCGGTTG ATCGAGGTAG CCGTACCCGA ACACCTGGGC AACCGGCAAC AGGCCCACGC GACGGTCTCC TGGCGTACGC CCGAGGGGGT CGTGGAGAGC GCGGAGACCG CGACGCCCAC GGACCTGGTG ACGGAGCTGG CCGCGCGCTT CGGCGGTGAG GTGCCCGGGC TGACGGTCAC CCGGCCAACT CTCGAGGACG TCTACCTGCG GATGATCGGA CACCGATGA
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Protein sequence | MENELAIVAR GLRKTYGENV AVAGVDLEVR RGEVFALLGP NGAGKTTTVE ILEGYRRRDA GEVSVLGSDP AAPAADWRNR IGIVLQGLGE FDELSVSELV HHFAGFYADA DDPEKVIARV GLAGKARART HTLSGGQKRR LDVALGIIGR PELLFLDEPT TGFDPEARRE FWDLIRDLAA AGTTIVLTTH YLDEAEALAD RVGVIADGRL IEVAVPEHLG NRQQAHATVS WRTPEGVVES AETATPTDLV TELAARFGGE VPGLTVTRPT LEDVYLRMIG HR
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