Gene Sare_4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4002 
Symbol 
ID5704888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4553962 
End bp4554621 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content68% 
IMG OID641273427 
Producthypothetical protein 
Protein accessionYP_001538783 
Protein GI159039530 
COG category[L] Replication, recombination and repair 
COG ID[COG1637] Predicted nuclease of the RecB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.308784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000199621 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCGGTTGG TGATTGCGAA GTGCTCTGTG GACTACGTGG GACGGCTCTC GGCCCACCTG 
CCGCCGGCCA CCCGGCTGGT CATGGTGAAG GCGGACGGGT CGGTGTCGAT TCACGCGGAC
GATCGGGCGT ACAAGCCGCT GAACTGGATG AGCCCGCCGT GTCGGTTGGA GGAGGCCCCG
GGCGTCTGGC GGGTGGTCAA CAAGGCTGGT GAGGAACTGC GAATCACCCT GGAGGAGGTC
TTCCAGGACA CCGCCTACGA CTTGGGCGTC GACCCGGGCC TGCGCAAGGA TGGCGTGGAG
GCGCACCTTC AGGAACTGCT GGCAGCCAGC CCGGAGGTAC TGGGTGAGGG CCTCACGCTG
ATCCGCCGGG AGTACATGAC GGCGATCGGC CCGGTGGACC TGTTGTGCCG CGACGCGGCG
CACGGCACCG TCGCCGTCGA GGTGAAGCGT CGCGGTGAGA TCGACGGTGT GGAGCAGCTC
ACCCGCTACC TGGAACTGCT CAATCGGGAT CCCCTGCTCG CGCCGGTGCA GGGCGTCTTC
GCCGCGCAGG AGATCAAGCC GCAGGCGCGA GTACTCGCCA CGGACCGGGG GATCCGCTGC
GTGGTCGTTG ACTACGACAA GCTGCGCGGC ATCGAGCGGG ACGAGCTGAC CCTGTTCTGA
 
Protein sequence
MRLVIAKCSV DYVGRLSAHL PPATRLVMVK ADGSVSIHAD DRAYKPLNWM SPPCRLEEAP 
GVWRVVNKAG EELRITLEEV FQDTAYDLGV DPGLRKDGVE AHLQELLAAS PEVLGEGLTL
IRREYMTAIG PVDLLCRDAA HGTVAVEVKR RGEIDGVEQL TRYLELLNRD PLLAPVQGVF
AAQEIKPQAR VLATDRGIRC VVVDYDKLRG IERDELTLF