Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3998 |
Symbol | |
ID | 5704884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4549098 |
End bp | 4549910 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641273423 |
Product | hypothetical protein |
Protein accession | YP_001538779 |
Protein GI | 159039526 |
COG category | [R] General function prediction only |
COG ID | [COG2945] Predicted hydrolase of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.029016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00260799 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGTACAC CCATCCGCGC CTCGTCGATC CTGCCCGGCC GCCGGGAGGA GATCGAGCTG CACACCGCCG ACGGGCTGCG TCTCGTCGGT GAGCTGGCCC GCCCGGCCCA CCGTGCCCCG GTCGCCACCC TGGTCTGCCT GCATCCGCTG CCCACCCACG GTGGAATGAT GGACAGCCAC GTGTTCCGCA AGGCCGCCTG GCGCCTGCCG GCCCTGGCCG ACCTGGCGGT GCTGCGTTTC AACACCCGGG GCACCTCCAG CATGCGTGGC ACCAGTGAGG GGGCCTTCGA CAACGCGGTC AGCGAGCGGT ACGACGTCGC CGCCGCCATC GAGTACGCGG AGTTTCATGA ACTGCCGGAG ATCTGGCTGC TCGGCTGGTC CTTCGGCACC GACCTGACCC TGCGGTACGG CTGTGACCCG GCGGTGGCCG GCGCCGTCCT GCTCTCCCCG CCGCTGCGCT TCTCCGGCCC CGAGGACCTG GCGAACTGGG CGTCCGCCGG CAAGCCGATC ACGGCGTTGG TGCCGGAGTT CGATGACTAC CTGCGGCCCG AGGAGGCGCG GGAGCGCTTC GCCGCGGTGC CGCAGGCTGA GGTGGTCGGG GTGCCCGGCG CCAAGCACCT GTGGGTCGGT GACGCCGAGA CCGTCCTGGA CGAGATCGTC AGACGGGTCA ACCCGTCCGC CCACGTGCCG CTGCCGACCA GCTGGGATGG CCCGTTGGAG ACCGGCGACG TCAGTGCCTA CGCGGACCGG ACGGTGGCGG CGTTCGCTGA CCGGCCGGTG CCCGGTCCAG CGGCCGGTCA GCGGGAATCC TGA
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Protein sequence | MSTPIRASSI LPGRREEIEL HTADGLRLVG ELARPAHRAP VATLVCLHPL PTHGGMMDSH VFRKAAWRLP ALADLAVLRF NTRGTSSMRG TSEGAFDNAV SERYDVAAAI EYAEFHELPE IWLLGWSFGT DLTLRYGCDP AVAGAVLLSP PLRFSGPEDL ANWASAGKPI TALVPEFDDY LRPEEARERF AAVPQAEVVG VPGAKHLWVG DAETVLDEIV RRVNPSAHVP LPTSWDGPLE TGDVSAYADR TVAAFADRPV PGPAAGQRES
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