Gene Sare_3998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3998 
Symbol 
ID5704884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4549098 
End bp4549910 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content72% 
IMG OID641273423 
Producthypothetical protein 
Protein accessionYP_001538779 
Protein GI159039526 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.029016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00260799 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGTACAC CCATCCGCGC CTCGTCGATC CTGCCCGGCC GCCGGGAGGA GATCGAGCTG 
CACACCGCCG ACGGGCTGCG TCTCGTCGGT GAGCTGGCCC GCCCGGCCCA CCGTGCCCCG
GTCGCCACCC TGGTCTGCCT GCATCCGCTG CCCACCCACG GTGGAATGAT GGACAGCCAC
GTGTTCCGCA AGGCCGCCTG GCGCCTGCCG GCCCTGGCCG ACCTGGCGGT GCTGCGTTTC
AACACCCGGG GCACCTCCAG CATGCGTGGC ACCAGTGAGG GGGCCTTCGA CAACGCGGTC
AGCGAGCGGT ACGACGTCGC CGCCGCCATC GAGTACGCGG AGTTTCATGA ACTGCCGGAG
ATCTGGCTGC TCGGCTGGTC CTTCGGCACC GACCTGACCC TGCGGTACGG CTGTGACCCG
GCGGTGGCCG GCGCCGTCCT GCTCTCCCCG CCGCTGCGCT TCTCCGGCCC CGAGGACCTG
GCGAACTGGG CGTCCGCCGG CAAGCCGATC ACGGCGTTGG TGCCGGAGTT CGATGACTAC
CTGCGGCCCG AGGAGGCGCG GGAGCGCTTC GCCGCGGTGC CGCAGGCTGA GGTGGTCGGG
GTGCCCGGCG CCAAGCACCT GTGGGTCGGT GACGCCGAGA CCGTCCTGGA CGAGATCGTC
AGACGGGTCA ACCCGTCCGC CCACGTGCCG CTGCCGACCA GCTGGGATGG CCCGTTGGAG
ACCGGCGACG TCAGTGCCTA CGCGGACCGG ACGGTGGCGG CGTTCGCTGA CCGGCCGGTG
CCCGGTCCAG CGGCCGGTCA GCGGGAATCC TGA
 
Protein sequence
MSTPIRASSI LPGRREEIEL HTADGLRLVG ELARPAHRAP VATLVCLHPL PTHGGMMDSH 
VFRKAAWRLP ALADLAVLRF NTRGTSSMRG TSEGAFDNAV SERYDVAAAI EYAEFHELPE
IWLLGWSFGT DLTLRYGCDP AVAGAVLLSP PLRFSGPEDL ANWASAGKPI TALVPEFDDY
LRPEEARERF AAVPQAEVVG VPGAKHLWVG DAETVLDEIV RRVNPSAHVP LPTSWDGPLE
TGDVSAYADR TVAAFADRPV PGPAAGQRES