| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3983 |
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| Symbol | |
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| ID | 5706658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4524324 |
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| End bp | 4526093 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641273408 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001538764 |
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| Protein GI | 159039511 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000432599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0119912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTCGC CCAAGGAGAT CTGTGGCATG AACGTGTGGA GAAGGCTCTC CGGCCCACGT
CCGGCCCTCG CGCTGACCGG TGTGAGTGCC CTTGTCATAG GTGGGTTGGT GACCCTGCCG
GGCACCATGG CCCACGCCGC CACCCAGTGC GAGGTGTCGT ACACCACGAA CGACTGGCCC
GGCGGGTTCA CCGCCGCCAT CAGCATCAAG AACACTGGAG ACGTGCTCGA CGGTTGGACG
CTCCGCTTCG CCTTTCCGGA CAGCAGCCAG CAGGTGGTGC ACGGCTGGTC GGCCCGGTAT
GGCCAGTCGG GTCAGGACGT CACCGCGCAG AATGAGTCGT ACAACGGTTC GGTGGCCAGC
GGCGCTACCG TCGTCATCGG CTTCAACGGC TCGTGGGACG GCAGTAACCC CAGGCCGACG
TCGTTCACTC TCAACGGGGT GGCTTGCAAC GGCGGCCCCA CCACGCCGCC GCCCACCACC
GCACCGCCGC CCACCACCCC GCCACCCGGT GCCCGGGTCG ACAATCCGTA CCTGAACGCA
GTGGGCTACG TGAACCCGGA GTGGAAGGCC AAGGCCGAGT CGGTTCCCGG CGGCGACCGG
GTGTCGAACA CGTCGACCGC CGTCTGGATC GACCGGATCG CAGCCATCGA GGGGACGGAT
GACAGCCAGT CCAACGGCCC GATGGGTGTG CGTGATCACC TAAACGAGGC GCTGCGTCAG
GGTGCCGACT ACATCCAGTT CGTCATCTAC AACCTGCCCG GCCGGGACTG CGCTGCGCTC
GCCTCGAACG GTGAGCTCGA GCCGGACGAG CTGCCCCGCT ACAAGGCCGA GTTCATCGAC
CCGATCGCGG CTATCCAGAG TGACGCGATG TACCAGGACC TGCGGATCAT AAACATCATC
GAAATCGACT CGCTGCCGAA CCTGCACGCC AACACCGGTA GCAACCCAGG TGCCACTCCG
ACCTGCGACC TTGTCAAGCA GAACGGCGCC TACGTCAACG GCATCGGCTA TGCGCTAGCC
ACGCTGGGTG CGATCAGCAA CGTCTACAAC TATGTGGACG CCGCGCACCA TGGTTGGATC
GGCTGGGACA GCAACTTCAG CCCGGTCGCC TCACTCCTGA AGGAGGCCGC CACGGCATCC
GGCAGTACGG TCGACAACGC GCACGGCTTC ATTGTCAACA CCGCCAACTA CTCGGCCTTG
CACGAGCCCC ATTTCCAGAT CACCGACATG GTCAACGGCC AGTCGATCCG CCAGTCCACG
TGGGTGGACT GGAACCAGTA CGTGGACGAG CTGTCCTTCG CCCAGGCGTT CCGCGACGAG
TTGGTCACCA AAGGCTTCGA CTCCGGAGTC GGGATGTTGA TTGATACTTC CCGAAACGGC
TGGGGTGGCA GCGCCCGGCC AACCGGTCCC GGTCCGATGA CTGACGTCGA CAGTTATGTC
GACGGTGGTC GCGTCGACCG ACGAATCCAC GCCGGTAACT GGTGCAATCA GTCTGGCGCG
GGCCTGGGTG AGCGGCCCAG GGCCGCGCCA GAGCCGGGCA TCGACGCCTA CGTCTGGGTG
AAGCCGCCGG GCGAGTCCGA CGGTTCCAGC GAGGAGATTC CGAACAACGA CGGCAAGGGC
TTCGACCGGA TGTGCGACCC AACGTACGAC GGCAATGCCC GTAACGGCTA CAACCCCAGT
GGAGCCCTGC CCGACGCACC GATCTCCGGC GCCTGGTTCC CCGCCCAGTT CCAGCAGCTC
ATGCAGAACG CCTACCCGCC GTTGCCCTGA
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| Protein sequence | MVSPKEICGM NVWRRLSGPR PALALTGVSA LVIGGLVTLP GTMAHAATQC EVSYTTNDWP
GGFTAAISIK NTGDVLDGWT LRFAFPDSSQ QVVHGWSARY GQSGQDVTAQ NESYNGSVAS
GATVVIGFNG SWDGSNPRPT SFTLNGVACN GGPTTPPPTT APPPTTPPPG ARVDNPYLNA
VGYVNPEWKA KAESVPGGDR VSNTSTAVWI DRIAAIEGTD DSQSNGPMGV RDHLNEALRQ
GADYIQFVIY NLPGRDCAAL ASNGELEPDE LPRYKAEFID PIAAIQSDAM YQDLRIINII
EIDSLPNLHA NTGSNPGATP TCDLVKQNGA YVNGIGYALA TLGAISNVYN YVDAAHHGWI
GWDSNFSPVA SLLKEAATAS GSTVDNAHGF IVNTANYSAL HEPHFQITDM VNGQSIRQST
WVDWNQYVDE LSFAQAFRDE LVTKGFDSGV GMLIDTSRNG WGGSARPTGP GPMTDVDSYV
DGGRVDRRIH AGNWCNQSGA GLGERPRAAP EPGIDAYVWV KPPGESDGSS EEIPNNDGKG
FDRMCDPTYD GNARNGYNPS GALPDAPISG AWFPAQFQQL MQNAYPPLP
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