Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3973 |
Symbol | |
ID | 5705250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4512628 |
End bp | 4513815 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641273398 |
Product | xylose isomerase |
Protein accession | YP_001538754 |
Protein GI | 159039501 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2115] Xylose isomerase |
TIGRFAM ID | [TIGR02631] xylose isomerase, Arthrobacter type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.025652 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCCCC ATCCCACCCC TGCCGACAAG TTCTCCTTCG GACTCTGGAC GGTGGGCTGG CAGGCCCGGG ATCCGTTCGG AGACGCCACC CGCCCGGAGT TGGACGCGGT CGAGGCGGTG CACCGGCTCG CCGAGTTGGG CGCATATGGC ATCACCTTCC ACGACGACGA CCTGATTCCC TTTGGGGCGG ACGCCGCCAC CCGCGACGCC CGCCTGAGCC GGTTCCGCCG GGCCCTCGAC GAGACCGGCC TGGTGGTGCC GATGGTCACC ACCAACCTCT TCACCCATCC CGTGTTCAAG GACGGCGGCC TCACCAGTAA CGACCGCGAT GTCCGGCGGT ACGCGTTACG CAAGGTGCTG CGCACCGTCG ACCTTGCCGT GGAGCTGGGT GCGCGTACCT TCGTGATGTG GGGTGGACGC GAGGGCGCCG AGTACGACGT CGCCAAGGAC GTCCGCGCCG CCCTCGACCG CTACCGCGAG GCGGTCGACC TGCTCTGCCA GTACACCGTG GACCAGGGGT ACGACCTGCG TTTCGCGATC GAGCCCAAGC CCAACGAGCC CCGCGGCGAC ATCCTGCTGC CGACTGTCGG GCACGCACTC GCCTTCATCG CCACCCTGGC CCGCCCGGAG CTGGTCGGCC TGAATCCGGA GGTCGGCCAC GAGCAGATGG CTGGGCTCAA CGTCACCCAC GGCATCGCCC AGGCGCTCTG GCAGGGCAAG CTGTTCCACC TCGACCTCAA CGGCCAGCGG GGCATCAAGT ACGACCAAGA CCTGGTCTTC GGCCACGGTG ATCTGCTCAA CGCGTTCGCC CTGGTTGATC TGCTCGAGAA CGGTGGCCCC GGCGGTGCGC CGGCGTACGA CGGCCCCCGG CACTTCGACT ACAAGCCGTC CCGCACCGAG GACAGCGCCG GGGTGTGGGT TTCGGCCGGG GCGAACATGC GTACCTATCT GTTACTCAAG GAACGGGCCG CGGCGTTCCG GGCGGACCCG GAGGTCATCG AGGCGCTGGC CGCGAGCCGG GTGGGCGAGC TGGCCACGCC GACGCTCGCC CCTGGCGAGA GCCACGCCGG GCTCCTCGCC GACCGCTCCG CCTTCGAGGA GTACGACGTG GGCGCCGCCG CGACACGTGG CTTCGACTTC GTCCGGCTCA ACCAACTCGC CGTCGAGCAT CTGCTCGGTG CCCGCTGA
|
Protein sequence | MAPHPTPADK FSFGLWTVGW QARDPFGDAT RPELDAVEAV HRLAELGAYG ITFHDDDLIP FGADAATRDA RLSRFRRALD ETGLVVPMVT TNLFTHPVFK DGGLTSNDRD VRRYALRKVL RTVDLAVELG ARTFVMWGGR EGAEYDVAKD VRAALDRYRE AVDLLCQYTV DQGYDLRFAI EPKPNEPRGD ILLPTVGHAL AFIATLARPE LVGLNPEVGH EQMAGLNVTH GIAQALWQGK LFHLDLNGQR GIKYDQDLVF GHGDLLNAFA LVDLLENGGP GGAPAYDGPR HFDYKPSRTE DSAGVWVSAG ANMRTYLLLK ERAAAFRADP EVIEALAASR VGELATPTLA PGESHAGLLA DRSAFEEYDV GAAATRGFDF VRLNQLAVEH LLGAR
|
| |