Gene Sare_3973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3973 
Symbol 
ID5705250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4512628 
End bp4513815 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content70% 
IMG OID641273398 
Productxylose isomerase 
Protein accessionYP_001538754 
Protein GI159039501 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2115] Xylose isomerase 
TIGRFAM ID[TIGR02631] xylose isomerase, Arthrobacter type 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.025652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCCC ATCCCACCCC TGCCGACAAG TTCTCCTTCG GACTCTGGAC GGTGGGCTGG 
CAGGCCCGGG ATCCGTTCGG AGACGCCACC CGCCCGGAGT TGGACGCGGT CGAGGCGGTG
CACCGGCTCG CCGAGTTGGG CGCATATGGC ATCACCTTCC ACGACGACGA CCTGATTCCC
TTTGGGGCGG ACGCCGCCAC CCGCGACGCC CGCCTGAGCC GGTTCCGCCG GGCCCTCGAC
GAGACCGGCC TGGTGGTGCC GATGGTCACC ACCAACCTCT TCACCCATCC CGTGTTCAAG
GACGGCGGCC TCACCAGTAA CGACCGCGAT GTCCGGCGGT ACGCGTTACG CAAGGTGCTG
CGCACCGTCG ACCTTGCCGT GGAGCTGGGT GCGCGTACCT TCGTGATGTG GGGTGGACGC
GAGGGCGCCG AGTACGACGT CGCCAAGGAC GTCCGCGCCG CCCTCGACCG CTACCGCGAG
GCGGTCGACC TGCTCTGCCA GTACACCGTG GACCAGGGGT ACGACCTGCG TTTCGCGATC
GAGCCCAAGC CCAACGAGCC CCGCGGCGAC ATCCTGCTGC CGACTGTCGG GCACGCACTC
GCCTTCATCG CCACCCTGGC CCGCCCGGAG CTGGTCGGCC TGAATCCGGA GGTCGGCCAC
GAGCAGATGG CTGGGCTCAA CGTCACCCAC GGCATCGCCC AGGCGCTCTG GCAGGGCAAG
CTGTTCCACC TCGACCTCAA CGGCCAGCGG GGCATCAAGT ACGACCAAGA CCTGGTCTTC
GGCCACGGTG ATCTGCTCAA CGCGTTCGCC CTGGTTGATC TGCTCGAGAA CGGTGGCCCC
GGCGGTGCGC CGGCGTACGA CGGCCCCCGG CACTTCGACT ACAAGCCGTC CCGCACCGAG
GACAGCGCCG GGGTGTGGGT TTCGGCCGGG GCGAACATGC GTACCTATCT GTTACTCAAG
GAACGGGCCG CGGCGTTCCG GGCGGACCCG GAGGTCATCG AGGCGCTGGC CGCGAGCCGG
GTGGGCGAGC TGGCCACGCC GACGCTCGCC CCTGGCGAGA GCCACGCCGG GCTCCTCGCC
GACCGCTCCG CCTTCGAGGA GTACGACGTG GGCGCCGCCG CGACACGTGG CTTCGACTTC
GTCCGGCTCA ACCAACTCGC CGTCGAGCAT CTGCTCGGTG CCCGCTGA
 
Protein sequence
MAPHPTPADK FSFGLWTVGW QARDPFGDAT RPELDAVEAV HRLAELGAYG ITFHDDDLIP 
FGADAATRDA RLSRFRRALD ETGLVVPMVT TNLFTHPVFK DGGLTSNDRD VRRYALRKVL
RTVDLAVELG ARTFVMWGGR EGAEYDVAKD VRAALDRYRE AVDLLCQYTV DQGYDLRFAI
EPKPNEPRGD ILLPTVGHAL AFIATLARPE LVGLNPEVGH EQMAGLNVTH GIAQALWQGK
LFHLDLNGQR GIKYDQDLVF GHGDLLNAFA LVDLLENGGP GGAPAYDGPR HFDYKPSRTE
DSAGVWVSAG ANMRTYLLLK ERAAAFRADP EVIEALAASR VGELATPTLA PGESHAGLLA
DRSAFEEYDV GAAATRGFDF VRLNQLAVEH LLGAR