| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3926 |
|---|
| Symbol | |
|---|
| ID | 5703777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4469575 |
|---|
| End bp | 4470936 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641273351 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001538708 |
|---|
| Protein GI | 159039455 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0560355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0287993 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC CGATCATGTC CGATTCTGAC CTGCGGGCCG CTGTCGAGCG GGAACTGCCC
GGTGTTCGGG CCGACCTCGA ACGCCTCGTC CGCATCCCGG GTATCGCGTT CGAGGGCTTC
GACCACGGGC ACGTGGAGCG CTCCGCGGCA GCGGTGGCGG AACTGCTGCG GGACTGCGGC
CTCGAGGTGC GGATTGCTCG GTCCGGCGGC CAGCCAGCCG TGATCGGGAC GAAGGCGGCA
CCGCCCGGCG CCCCGACGGT GCTGCTCTAC GCCCACCATG ACGTGCAGCC GGTTGGTGAC
CTGTCGCTGT GGGAGTCGGA CCCGTTCGAG CCGGTGGAGC GGGACGGCCG CCTCTACGGG
CGTGGTGCCG CCGACGACAA GGCGGGCATT ATGGCGCACA TCGCTGCGTT GCGGGCGTTC
GGTGATTCGC TGCCGGTGGG TGTCGTGCTG TTCATCGAGG GCGAGGAGGA GTACGGCTCC
GACTCGCTGG CAGGGCTGCT CGCCGAGTAC CGGGACCAGA TCGCCTCGGA CGTCATCGTG
ATCGCCGACT CCACCAACTG GGATATCGGC GTACCAGCGC TGACCACGTC GCTGCGCGGA
ATCGTGAACT GCTTCGTCGA GGTCCGGACG TTGGACCACG CCGTGCACAG CGGCATGTTC
GGTGGCGCGG TGCCGGACGC GCTGACCGCG CTGGTCCGGC TGCTCGCCAC GTTGCACGAC
GACGCTGGGA ACGTGGCCGT CGACGGGTTG GTCGGCCGTG GGGGCGCGGT CGTGGACTAC
CCGGAAGATC GCTTCCGCGC CGAGGCGGGA CTGGCGGAGG GGGTGCGCTT CATCGGCACC
GATCGGATCA CCGACCGACT CTGGACCAAG CCGGCCGTGG CGGTGATCGG CATCGACGCG
CCGGCGACCG GGGAAGCTCC GAACGCCCTG GTCCCGTCGG CGAAGGCCAA GCTCAGTGTG
CGGCTCGCGC CCGGCGACGA CCCCAAGCGA GCGTACGCGG CTCTTCGCGC CCACCTGAGC
GCGCACGCCC CGTGGGGTGC GCAGGTGTCG GTCACCCTTG AGCACGATGG CGATCCGTGC
GTTGTCGACG CCTCCGGTCC GATGTTCGAC GCGGCCCGCT CCGCGTTCCG CGTCGCCTGG
GACGGCACCG ACCCGGTGGA CATCGGGGTC GGCGGCTCGA TTCCGTTCAT CGCCACCTTC
CAGGAGATGT TCCCCCGGGC AGCGATCCTG GTGACCGGTG TGGAGGATCC GTACGCGCGG
GCGCACGGTC CAAACGAGAG CCTGCACCTG GGTGAGTTCG CCCGGGTGTG CCTGGCGGAG
GCACTGCTGC TACGTAACGT CGCTACCGCT GCACGGGGTT GA
|
|---|
| Protein sequence | MTTPIMSDSD LRAAVERELP GVRADLERLV RIPGIAFEGF DHGHVERSAA AVAELLRDCG
LEVRIARSGG QPAVIGTKAA PPGAPTVLLY AHHDVQPVGD LSLWESDPFE PVERDGRLYG
RGAADDKAGI MAHIAALRAF GDSLPVGVVL FIEGEEEYGS DSLAGLLAEY RDQIASDVIV
IADSTNWDIG VPALTTSLRG IVNCFVEVRT LDHAVHSGMF GGAVPDALTA LVRLLATLHD
DAGNVAVDGL VGRGGAVVDY PEDRFRAEAG LAEGVRFIGT DRITDRLWTK PAVAVIGIDA
PATGEAPNAL VPSAKAKLSV RLAPGDDPKR AYAALRAHLS AHAPWGAQVS VTLEHDGDPC
VVDASGPMFD AARSAFRVAW DGTDPVDIGV GGSIPFIATF QEMFPRAAIL VTGVEDPYAR
AHGPNESLHL GEFARVCLAE ALLLRNVATA ARG
|
|---|
| |