Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3924 |
Symbol | |
ID | 5703775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4468167 |
End bp | 4468985 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641273349 |
Product | hypothetical protein |
Protein accession | YP_001538706 |
Protein GI | 159039453 |
COG category | [S] Function unknown |
COG ID | [COG3346] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00286071 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0592694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCGTGT ACCGGTTCCT GCTGATGCCA CGCTGGCTTG GCGCGCTCGC ACTGACCCTG GTCGCGGCGG CGGTGATGGT GTTGCTGGGC GACTGGCAAC TGGCCCGCTA CCACGACCGT ACCGCGATCA ACGAGCAGAT CGACGCCGGT CAGCGGATGG ACCCGGTGCC GCTGCCCGAG GCGGTAGCCG CACCGACCGG TGGCGCCGGC ACCGTCGGGC CCACCCCGAC CGCAGAGCGG ACCTGGACGA AGGTCACCGC CGCCGGACAG TACGACACCG CGAACGTGAT CCTGGTCCGC GGACGCTCGC TGGAGCGTAC GGTCGGCTTC GAGGTGCTGA CCCCGCTGGT GCTGACCGAC GGCACGGCCC TACTGGTCAA CCGGGGCTGG ATCCCGCCGG CACCAGGTGG GGACGCCACC GCGCAGCCGA CGGTGCCCGC AGCCCCCACC GGCACCGTGA CCGTGACCGG CCGGATCCGG CCCGGTGAGG GCGGTTCACT CCCGGTCACC CGCCGCGACG GCAAACTGGA GACCCGTCGC GTCAGCCTGC CCCGGCTGGC CAGCGAGCTG CCGTACCCGG TCTACGGGGG CTATGTCCTG CTCGACACGC AGTCCCCCAC CGCAGACCCG ACCTTCGAGG CGGTGCCGGT CGGATACACG AACAACTGGC AGAACTACGG ATACGTCGTG CAATGGTGGA TCTTCGCCGG CATGACGCTG ATCGGCTTCG GCTACTTCGC TCGGAGGGAG GCCCGACAAC GGGCCGGCCT GGTGCGGGAA CGGGCCGCGG ACCGGGCGGC TGAACCGGCC TCCGCCTGA
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Protein sequence | MGVYRFLLMP RWLGALALTL VAAAVMVLLG DWQLARYHDR TAINEQIDAG QRMDPVPLPE AVAAPTGGAG TVGPTPTAER TWTKVTAAGQ YDTANVILVR GRSLERTVGF EVLTPLVLTD GTALLVNRGW IPPAPGGDAT AQPTVPAAPT GTVTVTGRIR PGEGGSLPVT RRDGKLETRR VSLPRLASEL PYPVYGGYVL LDTQSPTADP TFEAVPVGYT NNWQNYGYVV QWWIFAGMTL IGFGYFARRE ARQRAGLVRE RAADRAAEPA SA
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