Gene Sare_3924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3924 
Symbol 
ID5703775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4468167 
End bp4468985 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content71% 
IMG OID641273349 
Producthypothetical protein 
Protein accessionYP_001538706 
Protein GI159039453 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00286071 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0592694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGTGT ACCGGTTCCT GCTGATGCCA CGCTGGCTTG GCGCGCTCGC ACTGACCCTG 
GTCGCGGCGG CGGTGATGGT GTTGCTGGGC GACTGGCAAC TGGCCCGCTA CCACGACCGT
ACCGCGATCA ACGAGCAGAT CGACGCCGGT CAGCGGATGG ACCCGGTGCC GCTGCCCGAG
GCGGTAGCCG CACCGACCGG TGGCGCCGGC ACCGTCGGGC CCACCCCGAC CGCAGAGCGG
ACCTGGACGA AGGTCACCGC CGCCGGACAG TACGACACCG CGAACGTGAT CCTGGTCCGC
GGACGCTCGC TGGAGCGTAC GGTCGGCTTC GAGGTGCTGA CCCCGCTGGT GCTGACCGAC
GGCACGGCCC TACTGGTCAA CCGGGGCTGG ATCCCGCCGG CACCAGGTGG GGACGCCACC
GCGCAGCCGA CGGTGCCCGC AGCCCCCACC GGCACCGTGA CCGTGACCGG CCGGATCCGG
CCCGGTGAGG GCGGTTCACT CCCGGTCACC CGCCGCGACG GCAAACTGGA GACCCGTCGC
GTCAGCCTGC CCCGGCTGGC CAGCGAGCTG CCGTACCCGG TCTACGGGGG CTATGTCCTG
CTCGACACGC AGTCCCCCAC CGCAGACCCG ACCTTCGAGG CGGTGCCGGT CGGATACACG
AACAACTGGC AGAACTACGG ATACGTCGTG CAATGGTGGA TCTTCGCCGG CATGACGCTG
ATCGGCTTCG GCTACTTCGC TCGGAGGGAG GCCCGACAAC GGGCCGGCCT GGTGCGGGAA
CGGGCCGCGG ACCGGGCGGC TGAACCGGCC TCCGCCTGA
 
Protein sequence
MGVYRFLLMP RWLGALALTL VAAAVMVLLG DWQLARYHDR TAINEQIDAG QRMDPVPLPE 
AVAAPTGGAG TVGPTPTAER TWTKVTAAGQ YDTANVILVR GRSLERTVGF EVLTPLVLTD
GTALLVNRGW IPPAPGGDAT AQPTVPAAPT GTVTVTGRIR PGEGGSLPVT RRDGKLETRR
VSLPRLASEL PYPVYGGYVL LDTQSPTADP TFEAVPVGYT NNWQNYGYVV QWWIFAGMTL
IGFGYFARRE ARQRAGLVRE RAADRAAEPA SA