| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3896 |
|---|
| Symbol | |
|---|
| ID | 5705834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4437687 |
|---|
| End bp | 4438697 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641273321 |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_001538678 |
|---|
| Protein GI | 159039425 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.271019 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTACAC CGGTCGTCGA CGTGCACTCG CACGCCGTAC CGAAGGGCTG GCCCGACCTC
GGTGCGGCCT GCGGTGGATC CGGCTGGCCC TGGCTGCGGG TCGACTCCGA GCGAGCCGCG
ATGATCATGC TCGGGGAGAC CGAGTTCCGG CCGGTCGGTG TGGAGTGCTG GGATCCGGCC
ACCCGACTGG CGGACATGTC CACCGACGGT GTCGACGTGC AGGTGGTCTC GCCGACACCG
GTCTTCTTCT GCTACGACCG CCCCGCCGTC CAGGCGGTCA AGGTGGCCCG CATCTTCAAC
GACCGTATGT TGGAGATCAC GGCAGCCGCA GACGGCCGTT TGGTTCCGTT CTGCCAGGTG
CCGTTGCAGG ACCCGGAGGC CGCCTGCGCC GAGCTGGACC GCTGCCTCGC CGCGGGGCAC
GCCGGGGTGG AGATCGGAAA CCATGTCGGC GACCTCGACC TGGACGACAC CGGCATCGTC
GAGTTCCTCA CCCACTGCGC CGAGGTGGGC GCGCCGGTCT TCGTCCACCC GTGGGACATG
CCAGGCGGGC CGCGGCTGGA CCGGTGGATG GCCCGATGGC TCGCCGGGAT GCCGGCCGAG
ACCCACCTGT CGGTGCTGGC GATGATCCTC GGTGGCGTCT TCGACCGGGT GCCGGAGACG
TTGCGGATCT GCTTCGCACA CGGCGGCGGC AGCTTCCCGT TCTGGCTGGG CCGCGCGGAC
AACGCCTGGC ATCGCCGGGG AGACCTCGTC CGCGGCGCCT CGGAAGGGCC CCCCGGCTCG
TACCTGGACC GGTTCTTCGT CGATTCGGTG GTGTTCGATC CGGCGGCGCT GCGGCTCCTG
GTCGACACGA TGGGCGCCGA CCAGGTGCTG GTCGGCAGTG ACTATCCGTA CCCACTCGGG
GAGCGGCCGG TTGGTGCGGT CGTGCACCGG TCCGACTTCC TCACCGCCGA CCAGCGCATC
AGCCTGCTCG GCGGCAACGC GTTGCGGTTC CTCGGCCGGG CGCCGGGATG A
|
|---|
| Protein sequence | MGTPVVDVHS HAVPKGWPDL GAACGGSGWP WLRVDSERAA MIMLGETEFR PVGVECWDPA
TRLADMSTDG VDVQVVSPTP VFFCYDRPAV QAVKVARIFN DRMLEITAAA DGRLVPFCQV
PLQDPEAACA ELDRCLAAGH AGVEIGNHVG DLDLDDTGIV EFLTHCAEVG APVFVHPWDM
PGGPRLDRWM ARWLAGMPAE THLSVLAMIL GGVFDRVPET LRICFAHGGG SFPFWLGRAD
NAWHRRGDLV RGASEGPPGS YLDRFFVDSV VFDPAALRLL VDTMGADQVL VGSDYPYPLG
ERPVGAVVHR SDFLTADQRI SLLGGNALRF LGRAPG
|
|---|
| |