Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3890 |
Symbol | |
ID | 5705828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4430597 |
End bp | 4431796 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641273315 |
Product | hypothetical protein |
Protein accession | YP_001538672 |
Protein GI | 159039419 |
COG category | [S] Function unknown |
COG ID | [COG4198] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.282654 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTCG CCCATCCGAT CGCCCGGGCC TGGATCACCA CCGGCGGCAC CGGCGCGCAG AACTACGACG AGTTCGCCGA CGACGCGGAG ATCACCGCGA TCATCGAGGC GAATCCGCAC AGTGCCCTCG GCATCGAGAT GCCGCACCGG GCCCCGGAGA GCCGGGGGAA GGCCTTCCTC GACGCGCTGC CGGACGCGGC GGCCCGGCTG GCCGAGGCCA AGGCGGCTGG CAGCTACACA CCTGCCGAGC AGGTGGTGGT CCTCTACCGA ATCAGCGCGC CGGACGAGGA GCCCGGGTAC GGGCTGTTCG TCATGGTCGA CACCGACCAG ATCTCGACCA GCGCCGACGA GCCGGGTCTG GTCATCCGTA ACGAGGACGT GTTCATCTCC AAGGTGCGCG AGCGGGTCGC CCTCGCCGAG ACCCTGGGGC ACCTGCTGTC GCCGGTGCTC CTGCTGCAGA CCGGCCGCGG CGACGAACTG CACGCCGCCC TCGCCGCAGC CACGGACCGG GCCGGGGTGC CGGCCGCCAC CGACACCGAT CAGGCCGGGC GCACGCATGC AGTGTGGCTG GTCGGTCCAG GCCGAGAGCA GGATGAGCTG ACCGCCCTGG CGGGCGGTGG CGAGTTGGTC GTCGCCGACG GCAACCACCG TAGTCTCGCG GCCCAGACCG GCGGGCTACC ACGCTTCCTG GCCGTGGTCA CCACGCCGGC CTCGGTCGCC ATCGCGCCGT ACAACCGGCT GGTCGAACAG CTCACCACCA CCCCAGACGA ACTGGTCGAC CGGCTTCGCA CCGCCGGCGC CCAGGTCGAG CCGATCGACG CGCCGGTCGA GGTCCCGGCA GCGGGCGGCA CCGTCCACCT CCGGCTACCC GATGCCGCGT ACGCGGTACG CCTGCCTCGG GTGGGCGCCG GACGCCTGGA GAACCTGGAC CATGCCCTGG TAGAGCGGTT GCTGCTGCGG GACGCGTTGG GGCTGGAACC GGGCGACAAG CGGATCATCT ACGTGGGCGG CGACTACCCG GCGACTTGGC TTTCCGGTGA GGTCGACGCC GGACGAGCCG AACTGGCCGT CCTCGTCGCG CCGGTGACCG TGGACGACTT CGTCGCGGTG AACCTGGCGC GGGAGAAGAT GCCACGCAAG AGCACCTGGT TCACCCCGAA GGCCCGCGGC GGCCTGGTCG TCGCCGAGCT GGTGTCCTGA
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Protein sequence | MTVAHPIARA WITTGGTGAQ NYDEFADDAE ITAIIEANPH SALGIEMPHR APESRGKAFL DALPDAAARL AEAKAAGSYT PAEQVVVLYR ISAPDEEPGY GLFVMVDTDQ ISTSADEPGL VIRNEDVFIS KVRERVALAE TLGHLLSPVL LLQTGRGDEL HAALAAATDR AGVPAATDTD QAGRTHAVWL VGPGREQDEL TALAGGGELV VADGNHRSLA AQTGGLPRFL AVVTTPASVA IAPYNRLVEQ LTTTPDELVD RLRTAGAQVE PIDAPVEVPA AGGTVHLRLP DAAYAVRLPR VGAGRLENLD HALVERLLLR DALGLEPGDK RIIYVGGDYP ATWLSGEVDA GRAELAVLVA PVTVDDFVAV NLAREKMPRK STWFTPKARG GLVVAELVS
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