Gene Sare_3875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3875 
Symbol 
ID5707472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4417344 
End bp4418141 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content66% 
IMG OID641273299 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001538658 
Protein GI159039405 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.911716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000030187 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGCGTTG CCGTCTGTCA GTTGAACGCC CGGGAAGACC GAAGGTCGAA CCTGGCGGCC 
GCCGAGGTAC TGCTGGAACG TGCGGCGGCA GGCAACGCCG ATCTCGCGGT GCTGCCCGAA
TACGTTGACT ATCTCGGCCC AGCCGACGGG CAACCGACCC TGGAACCGGT CGACGGGGAG
GTCGGGCAGT TCTTCGCCGA TGCTGCGCAG CGGCTCGGTA TGTGGGTTGT CGTTGGTTCG
ATCCACGAGC GGGGTCCGGA CCCGGAGCGT ACCTACAACA CCTGTCTGGT CTTCGACCGA
TCAGGTGCGC TCGCCGCCAC GTACCGCAAG ATCCATTTGT ACGACGTGGA GATTCCCGGC
CGGGTGTCGT ATCTCGAGTC GGCGACGGTC GCTGCCGGTT CACAACCGGT CGTCGTTGAG
GTGGAGGGCA TCCGGGTCGG CCTGTCGATC TGCTATGACC TGCGCTTTCC CGAGCTGTAT
CGCCAGCTCG CCACTGATGG CGAGGCTGAC CTACTCCTTG TTCCGGCAGC CTTCATGCTG
CACACCGGGC GGGATCACTG GGAGGTGTTG CTACGCGCCC GGGCCATCGA GAACCAGTGT
TTCGTGGCGG CCGCCGGCCA GACGGGAGAC CACGAGCCGG GGCGCACCTG CTTCGGGCGC
AGCATGGTGG TCGACCCTTG GGGCACGGTG CTCGCGCAGG TACCCGACGG CTCGGGGCTC
GCGATTGTTG ATCTGGACCT GGAGCGGCTG CGGACGATCC GCGCCGAGTT GCCGAGCCTG
GCCAACCGCC GTCTCTAA
 
Protein sequence
MRVAVCQLNA REDRRSNLAA AEVLLERAAA GNADLAVLPE YVDYLGPADG QPTLEPVDGE 
VGQFFADAAQ RLGMWVVVGS IHERGPDPER TYNTCLVFDR SGALAATYRK IHLYDVEIPG
RVSYLESATV AAGSQPVVVE VEGIRVGLSI CYDLRFPELY RQLATDGEAD LLLVPAAFML
HTGRDHWEVL LRARAIENQC FVAAAGQTGD HEPGRTCFGR SMVVDPWGTV LAQVPDGSGL
AIVDLDLERL RTIRAELPSL ANRRL