Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3862 |
Symbol | |
ID | 5705893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4393734 |
End bp | 4394429 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641273283 |
Product | hypothetical protein |
Protein accession | YP_001538645 |
Protein GI | 159039392 |
COG category | [S] Function unknown |
COG ID | [COG5011] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.915383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00289458 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCGGTTCA CCTCGCACCG GGACTTCGCG CGCGCCTTCG AACGCGCGCT GCGCCGGGCG GGCGTGCCCA TGGCGTACTC CCAGGGCTTC ACGCCGCACC CAAAGATCTC CTACGCCAGT GCCGCGCCTA CCGGTGTGGC GAGCGAGGCC GAATACCTGG AGGTCGGGCT GCGTGAGCCG GTTGACCCGG CAGCGTTGCG TGCCGCGCTC GACGCCGCTC TCTCGCCCGG GCTCGACGTT CTGGAGGCCG TGGTCGCGAC CGGCGGTAGT CTCGCCGACC GGATCGAGGC GGCGCACTGG CGGATCGAGT TGCCGGGGGT TACCCCGGAG GTTCTGGGCC AGGCGGTGAG TGCCTTCACC GCCGCGGATG AGGTCCTCGT CGAGCGGATG ACCAAGCAGG GTCGGCGGAC CTTCGACGCC CGCGCAGCTG TTACGGTCAT CGATGTGATC ATGCCGGACG AGATGCCTTC TGAGGTACCG GCAGTACCGT GTGCGATACT CGAGCTGGTC GTGCGGCAGG TCACTCCCGC TGTTCGACCC GATGACGTCC TTTCCGGCCT CCGCGTGGTG GCCGACCTGG AGCCGCCGGT GTCGCCGCGG GTGACCCGGC TGGCTCAGGG CACGCTGACT GCGCAGGGTG CGATCGCGGA TCCGTTGGAA GCGGGCCGTG ACGGGGCAAC CATCGGTGGG CGCTGA
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Protein sequence | MRFTSHRDFA RAFERALRRA GVPMAYSQGF TPHPKISYAS AAPTGVASEA EYLEVGLREP VDPAALRAAL DAALSPGLDV LEAVVATGGS LADRIEAAHW RIELPGVTPE VLGQAVSAFT AADEVLVERM TKQGRRTFDA RAAVTVIDVI MPDEMPSEVP AVPCAILELV VRQVTPAVRP DDVLSGLRVV ADLEPPVSPR VTRLAQGTLT AQGAIADPLE AGRDGATIGG R
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