Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3858 |
Symbol | obgE |
ID | 5705889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4388073 |
End bp | 4389518 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641273279 |
Product | GTPase ObgE |
Protein accession | YP_001538641 |
Protein GI | 159039388 |
COG category | [R] General function prediction only |
COG ID | [COG0536] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR02729] Obg family GTPase CgtA [TIGR03595] Obg family GTPase CgtA, C-terminal extension |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00382252 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACGACGT TCGTTGACCG GGTCGTCCTG CACCTGCAGG CCGGCGACGG CGGGCACGGC TGTGTCTCGA TCCACCGGGA GAAGTTCAAG CCGTTCGGCG GCCCGGACGG GGGTAACGGC GGGCATGGCG GCAGCGTCTC GCTGGTCGTT GACCCGCAGG TGCACACACT GCTCGACTTC CATTTCCGCC CGCACGTCAA GGCATCCAAC GGTAAGGGTG GCGCCGGATC GAACCGGGAC GGCGCGAACG GTGCCGACCT GGTCCTCAGG GTGCCCAACG GCACTGTCGT GCAGACCACC GGCGGTACGG TGCTTGCTGA CCTGGTCGGC GCCGGGACGA CCTTCGAGGT GGCCCGGGGC GGTCGGGGCG GTCGGGGTAA CGCGGCGCTG GCCAACGCCC GCCGCAAGGC GCCAGGTTTC GCTGAGTTGG GTGAGCCCGG CGACAAGCTG GACGCGGTGC TGGAGCTCAA GAGCGTCGCC GACATCGGTC TGGTCGGCTA TCCGTCCGCG GGTAAGTCGT CGCTGATCTC AGTGATCTCC GCGGCCAAGC CGAAGATCGC CGACTACCCA TTCACCACCC TCGTGCCGAA CCTCGGCGTG GTCCGAGTGG ACAACCACAC CTTCACCGTG GCGGACGTGC CCGGCCTGAT CCCGGGCGCG GCCACGGGCA AGGGGCTCGG CCTGGAGTTC CTCCGGCACG TCGAGCGCTG CGCGGTACTC GTGCACGTGG TCGACACCGC GACGTTGGAA ACGGCCCGTG ACCCGGTGGC CGACATCGAC GCGATCGAGG CAGAGCTGAC CGCGTACGGT GGGCTGGCCG ACCGGCCGCG CCTGGTCGCG CTCAACAAGA TTGACGTGCC CGACGGGCGT GACCTGGCCG AGATCGTCCG GCCGGACCTG GAGGCCCGCG GTTTCCGTGT CTTCGAGGTC TCGGCGGCCA CTCGTGAAGG GCTGAAGGAA CTCATGTTCG CCATGGGTGA GTTGGTGGCG GCGGCACGTG CGGCGGCACC GCCGGTCGAA CCTACGCGAA TCGTCATCCG CCCCAAGGCG GTCGACGACG CGGGCTTCAC CGTGGAGGCA GCGCCGGACG GCGCCTGGGT GGTGCGGGGC ACCCGTCCCG AACGGTGGAT TCGGCAGACG AACTTCGACA ACGAGGAGGC GGTCGGCTAC CTGGCTGACC GACTGGCCCG ACTCGGCGTC GAGGAGAAGC TCGGCAAGGC CGGCGCGCAG GCAGGCGACC TGGTTCGGAT CGGCGAGCGT GAGTTCGATT GGCATCCCAC GCTGTACGCC GAGTTCGTCC CCGGTGTTCG GGGCGGCGAC CAGCGGCTGG CGGAGAAGAC GCAGCGGCCT TCGGCCGCCG AGCGGCTGGC GGCCCGTAAG GCCCGGCGGC AGCGCCCAGG CGACGAACCC GAATCCGACG AACTGGACGG CGACAGCGGG GAGTGA
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Protein sequence | MTTFVDRVVL HLQAGDGGHG CVSIHREKFK PFGGPDGGNG GHGGSVSLVV DPQVHTLLDF HFRPHVKASN GKGGAGSNRD GANGADLVLR VPNGTVVQTT GGTVLADLVG AGTTFEVARG GRGGRGNAAL ANARRKAPGF AELGEPGDKL DAVLELKSVA DIGLVGYPSA GKSSLISVIS AAKPKIADYP FTTLVPNLGV VRVDNHTFTV ADVPGLIPGA ATGKGLGLEF LRHVERCAVL VHVVDTATLE TARDPVADID AIEAELTAYG GLADRPRLVA LNKIDVPDGR DLAEIVRPDL EARGFRVFEV SAATREGLKE LMFAMGELVA AARAAAPPVE PTRIVIRPKA VDDAGFTVEA APDGAWVVRG TRPERWIRQT NFDNEEAVGY LADRLARLGV EEKLGKAGAQ AGDLVRIGER EFDWHPTLYA EFVPGVRGGD QRLAEKTQRP SAAERLAARK ARRQRPGDEP ESDELDGDSG E
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