Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3853 |
Symbol | |
ID | 5707931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4385093 |
End bp | 4385494 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641273275 |
Product | iojap-like protein |
Protein accession | YP_001538637 |
Protein GI | 159039384 |
COG category | [S] Function unknown |
COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.782657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00260799 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGACAGTTT CCGAACGCGC ACACGAGCTG GCGACCGCCG CCGCCCAGGC CGCCGCCGAC AAAAGGGCGC AGGACATCGT CATCATCGAT GTGGGCGATC AGCTGGCCAT CACCGACGCG TTTCTGCTCG CTGCCGCCCC GAATGAGCGT CAGGTGCTCG CCATCGTCGA CGCGATCGAG GAGCGACTGC TCCAGCTGCC GGAGAAGGCC AAGCCGGTCC GGCGCGAGGG GGAGCGGGGC GGTCGCTGGG TGCTGCTCGA CTACGTGGAC ATCGTCGTGC ATGTCCAGCA CACCGAGGAG CGCGAGTTCT ACGCGTTGGA CCGGCTTTGG AAGGACTGCC CACAGATCCC CTTCATCGAC CGTGATCTCG CTGCTGCTGA ACCCGGCGTT GCCGCCGAAT GA
|
Protein sequence | MTVSERAHEL ATAAAQAAAD KRAQDIVIID VGDQLAITDA FLLAAAPNER QVLAIVDAIE ERLLQLPEKA KPVRREGERG GRWVLLDYVD IVVHVQHTEE REFYALDRLW KDCPQIPFID RDLAAAEPGV AAE
|
| |