Gene Sare_3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3853 
Symbol 
ID5707931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4385093 
End bp4385494 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content66% 
IMG OID641273275 
Productiojap-like protein 
Protein accessionYP_001538637 
Protein GI159039384 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.782657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00260799 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACAGTTT CCGAACGCGC ACACGAGCTG GCGACCGCCG CCGCCCAGGC CGCCGCCGAC 
AAAAGGGCGC AGGACATCGT CATCATCGAT GTGGGCGATC AGCTGGCCAT CACCGACGCG
TTTCTGCTCG CTGCCGCCCC GAATGAGCGT CAGGTGCTCG CCATCGTCGA CGCGATCGAG
GAGCGACTGC TCCAGCTGCC GGAGAAGGCC AAGCCGGTCC GGCGCGAGGG GGAGCGGGGC
GGTCGCTGGG TGCTGCTCGA CTACGTGGAC ATCGTCGTGC ATGTCCAGCA CACCGAGGAG
CGCGAGTTCT ACGCGTTGGA CCGGCTTTGG AAGGACTGCC CACAGATCCC CTTCATCGAC
CGTGATCTCG CTGCTGCTGA ACCCGGCGTT GCCGCCGAAT GA
 
Protein sequence
MTVSERAHEL ATAAAQAAAD KRAQDIVIID VGDQLAITDA FLLAAAPNER QVLAIVDAIE 
ERLLQLPEKA KPVRREGERG GRWVLLDYVD IVVHVQHTEE REFYALDRLW KDCPQIPFID
RDLAAAEPGV AAE