| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3848 |
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| Symbol | |
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| ID | 5707926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4381341 |
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| End bp | 4382180 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641273270 |
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| Product | helix-hairpin-helix repeat-containing competence protein ComEA |
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| Protein accession | YP_001538632 |
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| Protein GI | 159039379 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00294158 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCAGACG ACGAGGAGAC GGTGGTCCGG GACCGCCTGC ACCGGGTGCT ACCGGTAGAA
GACGAGTTGG CCGGCGCCGG CCGGGCGGTG CCCGAGGCCC AGGCGGTGGT GACGCGACGC
GAGGCGCTGA GCAGTCCGCG ACCCCACCCA CCTGACGGGT CGGACGACGG CGCGGCGTCA
TCCGTTCCGC CGGCTGGCGA GCCGTCAAGC CGGGTGCTGC CAGGACCGGG AGCGTTCGAC
CCGGGGCGGC GCGGTGTGCG GGCTCTGGCC GTCGTCGCCG TGCTGGTAGT GCTCGGGGCC
GGCTTCTGGG CGTGGCAGTC CCGACCGCAG GTCGAGCAGG TCGCGCCGGT CGCGGAGGCG
GGACCGGTCG CCCTGTCCGT GTCCGGTGGG CCGACGGCGA CGCCGGGTGG TGAGCTGGTG
GTGGCGGTCG CCGGTAAGGT CCGCCGGCCG GGACTGGTCC GGGTGTCGGC GGGCGCGCGG
GTCGCTGACG CGGTGCAGGC GGCCGGTGGG GCGCTGCCCG GCGTCGATGT GGCGCTGTTC
AACCCAGCCC GAAAGGTAGT TGACGGGGAA CTCATTCTGG TCGGCGTCCC CACGCCGCCG
GGAGCGGCCC CCGTGGCCGC CGGCGGGGAG GCGGCAGCGG CGACCGGAGG CAAGGTCAAC
CTGAACACCG CCACCCTGGC GCAGCTCGAC ACGCTGCCCG GAGTCGGCCC GGTGCTGGCG
CAGCGCATCC TCGCTCACCG CCAGCAGCAC GGCGGCTTCC GTTCGGTGAG CGACCTGCGC
CAGGTCGGCG GTATCGGCGA TACCCGATAC GAGCAGCTCA AGGATCTGGT GACGGTGTGA
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| Protein sequence | MSDDEETVVR DRLHRVLPVE DELAGAGRAV PEAQAVVTRR EALSSPRPHP PDGSDDGAAS
SVPPAGEPSS RVLPGPGAFD PGRRGVRALA VVAVLVVLGA GFWAWQSRPQ VEQVAPVAEA
GPVALSVSGG PTATPGGELV VAVAGKVRRP GLVRVSAGAR VADAVQAAGG ALPGVDVALF
NPARKVVDGE LILVGVPTPP GAAPVAAGGE AAAATGGKVN LNTATLAQLD TLPGVGPVLA
QRILAHRQQH GGFRSVSDLR QVGGIGDTRY EQLKDLVTV
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