Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3843 |
Symbol | |
ID | 5707921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4375713 |
End bp | 4376774 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641273265 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_001538627 |
Protein GI | 159039374 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.451264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000808201 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACCACCC GCCGGCCCGG CTGGTCCGAT CTGCCAGTGG GAATGCGGGC GGCTCTCGCC GACCGCCTCG GTGCCCCCGT GGTCGCCACC CGCACCGCAA CCGCCGGTTT CACGCGTGGC TTCGCCGGGG TACTGACCGC CGCCGACGGC AGTCGGGCCT TCGTCAAGGC CGCGCCCCAC GACTCCCGCC TAGCCAGCTG GTACGGATGG GAGGCGGCGA TCCTCGACCG GCTCCCGTCC GGCTTGCCGG CGCCCCGCAC CCGCTGGACG CTGGCCGACT CCAGCTGGTT CGCGATCGCC CTCGACGTGG TCGACGGCTA CCCGCCCCGG CGCCCGTGGG AGCCGTCGGA GCTGGCCAGC ACCCTGACCG CGTACGCGGG CGTCGCCGCC GCCCTGAACA CCCCGCCGAA CGACCTCGCC GCGCTCAACC CGCCCCACCT GGCCGACCTG GCCCAGGCCG ACATCCTCCG TTGGGGCGAT GTGGCGGCGG GCCGGGAGCC CGCTCCGCCG TTCCCCGCCG GACTTGAGCA GCGGCTGCCC GAGTTGGTCG GGCTCGAGTC CCGACTCCCG GGGTACGTCG CTTCGGCGTC CAGTCTGATC CACGGCGACC TACGGCCGGA CAACGTGCTG TTCGGCCCGG ACGGGCAGGT GTGGTTCTGC GACTGGACCT GGCTCTGTCG CGGTCCGGCC TGGTTCGACC TGGTGACGCT GCTCCTCGGC GGGCACGCCG CCGGCGATCC GGAGGTCACG GTCGGACCAC TGGCCACGAC CGGCGGCACG GGGTTGCCTG CCGGCCCGAC GAGGGTGTCC GGCCCGGAGG CCGCCGTCGC ACCAGCGCCC GCCGTGACCA CGGACTGGCT GGACGCCGCC TTCGCGGCGC ATCCAGCCGC CGCCAACGCT CCCCCAGACG CCCTGGACGT CACGCTGGCG GCGCTGGCCG GCTACTTCCT CACCACCCCG ACCCTGGTCC CGGACACCGC GACCGAACAG TTCACGGCCC ACCAGCGCCG CAGCGGCGAG TACGCATTCG CCTGGCTCGC CTGCCGTCAG GGCTGGTCCT GA
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Protein sequence | MTTRRPGWSD LPVGMRAALA DRLGAPVVAT RTATAGFTRG FAGVLTAADG SRAFVKAAPH DSRLASWYGW EAAILDRLPS GLPAPRTRWT LADSSWFAIA LDVVDGYPPR RPWEPSELAS TLTAYAGVAA ALNTPPNDLA ALNPPHLADL AQADILRWGD VAAGREPAPP FPAGLEQRLP ELVGLESRLP GYVASASSLI HGDLRPDNVL FGPDGQVWFC DWTWLCRGPA WFDLVTLLLG GHAAGDPEVT VGPLATTGGT GLPAGPTRVS GPEAAVAPAP AVTTDWLDAA FAAHPAAANA PPDALDVTLA ALAGYFLTTP TLVPDTATEQ FTAHQRRSGE YAFAWLACRQ GWS
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