Gene Sare_3833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3833 
Symbol 
ID5704857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4365086 
End bp4365448 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content69% 
IMG OID641273255 
Producthistidine triad (HIT) protein 
Protein accessionYP_001538617 
Protein GI159039364 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00753492 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCCCAA CTGACTGCCT GTTCTGCCGT ATCGTCGCCG GAGAGATCCC GGCCACCGTC 
GTCCGGGAGA CCGGGACAAC CCTCGCGTTC CGCGACATCG ATCCGAAAGC TCCGGTGCAC
GTGCTGGTGA TCCCGAAGGA GCACTACGCC GATGTGGCCA CCCTGGCGCA GGACGATCCC
GGGCTCACCG CTGAGGTGCT CGCCACCGCC GCGGCGGTGG CCGAGGACGA GGGCCTGCTC
GGCGACGGCT TCCGGCTGAT GTTCAACACC GGGGCGTACG GCGGCCAGGA GGTCTTCCAC
GTCCACGCAC ACCTGCTCGG CGGAGCGCCG CTCGGGCCGA TGCTGGCGGG TAACCTCACC
TGA
 
Protein sequence
MSPTDCLFCR IVAGEIPATV VRETGTTLAF RDIDPKAPVH VLVIPKEHYA DVATLAQDDP 
GLTAEVLATA AAVAEDEGLL GDGFRLMFNT GAYGGQEVFH VHAHLLGGAP LGPMLAGNLT