| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3830 |
|---|
| Symbol | |
|---|
| ID | 5704854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4361985 |
|---|
| End bp | 4363379 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641273252 |
|---|
| Product | CBS domain-containing protein |
|---|
| Protein accession | YP_001538614 |
|---|
| Protein GI | 159039361 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0304655 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGGCT CTTCCGCCGC AACAACGGTC GGCTCTGCCG GCCTTCCCGA CGTGCAGCTG
ATCGTGGTCG CGGCCGGGCT GGTGGTCCTC GCCGGCCTGA TCGCGATGAC GGAGGCCGCG
CTCTCCGCCG TCTCTCCGGC ACGCGCCGCC GAACTGGCCC GCGATGGCGC CCGTGGCGCC
CGAGCGTTGC AGTCCGTCGC GAGTGACGTG GTCCGGCACC TCAACCTGCT GCTGCTGTTG
CGGCTGCTCA CCGAGCTGAG CGCGACCACT CTGGTGGCGC TGGTCGCGGT CGACTCGTTC
GGCGCTGGTT GGCGGGCCGC GCTGGTGACG GCCGGGGCGA TGACCGTGGT CAGCTTCGTG
GTGGTCGGCG TCGGGCCGCG CACGATCGGC CGGCAGCATG CCTACGCGGT GGGTCGCGGC
GTGGCGCCGC TGGTGCGTTG GCTGGGTCGG GCGCTCAACC CACTCGCCTC CCTGCTGATC
CTGATCGGCA ACGCGGTCAC CCCGGGGCGG GGCTTCCGGG AGGGGCCCTT CGCCACCCAG
GTGGAGCTGC GCGAACTGGT GGACCTGGCC GAGCAGCGCG GTGTGGTGGA GCATGGCGAG
CGGCAGATGA TCCACTCCGT CTTCGCGCTC GGCGACACCA TCGCCCGCGA GGTGATGGTG
CCGCGTACCG AGATGGTGTG GATCGAGCGG CACAAGATGC TGTCCCAGGC CCTGGCGCTC
TTTCTGCGGT CCGGCTTCTC TCGGATTCCG GTGATCGGCG AGAGCGTCGA CGACGTGCTC
GGCGTGCTCT ATCTGAAGGA TCTGATCCGG CGCACGCAGG GCGGTGCCCC GGAGGACCGA
CGCCTCCCCG TGGCCGAGCT GATGCGTCCG GCCACCTTCG TGCCGGAATC CAAGCCGGTC
GACGACCTGC TCTCGGAGAT GCAGGCCGCC CGGAACCACC TGGTAATCGT CGTTGACGAG
TACGGCGGTA CCGGCGGGTT GGTCACCATC GAGGACATCC TGGAGGAGAT CGTCGGCGAG
ATCACCGACG AGTACGATGT CGAGCGCCCA CCGGTCGAGC GCCTCGACGA CGACGCGGTG
CGGGTCACCG CGCGGCTTCC CGTGGATGAC CTCGGCGAGT TGTTCGACAC CGAGCTGCCC
GGCGACGAGG TGGAGACGGT GGGCGGACTG CTCGCGCAGT CGCTGGGCCG GGTTCCGATC
CCCGGTGCCC AGGTCGAGGT GGCTGGTCTG CGGCTGCTCG CCGAGGGCAC CACCGGCCGG
CGCAACCGGA TCGACACGGT GCTGGTGCGC CGGGTGGAGC CGGCCGACCA GCAGCACGAT
CCGGGTCGCG GTGAACCGAC CGAGACCCGG GACGACACCG ACCAAGCCGA GGAGAGGCAA
CCCGCCGATG CCTGA
|
|---|
| Protein sequence | MMGSSAATTV GSAGLPDVQL IVVAAGLVVL AGLIAMTEAA LSAVSPARAA ELARDGARGA
RALQSVASDV VRHLNLLLLL RLLTELSATT LVALVAVDSF GAGWRAALVT AGAMTVVSFV
VVGVGPRTIG RQHAYAVGRG VAPLVRWLGR ALNPLASLLI LIGNAVTPGR GFREGPFATQ
VELRELVDLA EQRGVVEHGE RQMIHSVFAL GDTIAREVMV PRTEMVWIER HKMLSQALAL
FLRSGFSRIP VIGESVDDVL GVLYLKDLIR RTQGGAPEDR RLPVAELMRP ATFVPESKPV
DDLLSEMQAA RNHLVIVVDE YGGTGGLVTI EDILEEIVGE ITDEYDVERP PVERLDDDAV
RVTARLPVDD LGELFDTELP GDEVETVGGL LAQSLGRVPI PGAQVEVAGL RLLAEGTTGR
RNRIDTVLVR RVEPADQQHD PGRGEPTETR DDTDQAEERQ PADA
|
|---|
| |