| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3803 |
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| Symbol | |
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| ID | 5704554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4332499 |
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| End bp | 4334094 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641273225 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_001538587 |
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| Protein GI | 159039334 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.19587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACATGG GCGGATCGGC TGGGCGGCCC GGCAGCGGGA GCGTCGACCG GTTGCTGCTG
TGCCTCGCCG TTGGCGGCGT GCTGGCCGTC GTGGCCTGGG GCGTCCTGGA CCGGGAGTCG
GTGTCGGCTG TCGGTCAGAC CGGGCTGAAC TGGGTCATCA CCACGTTCGG CTGGTTGTTC
GTCGTCGCGG CGAACGCCTT TCTGGTGTTG GCCGTGGTGC TGGCACTCTC CCGCTTCGGC
ACCATTCGGC TGGGGCCCGA CGCCGAGCGG CCGGAGTTCA GCACGTTGGC CTGGGTCGCC
ATGATGTTCA GCGCAGGCAT GGGGATCGGC CTGGTCTTCT TCGCCGTGGC CGAGCCGATC
CAGCACTACG CGTCGCCGCC GCCGGCGACC GGGGTCGAGC CGGAGACCGG TGCCGCCGCC
TCGGCTGCCA TGCAGTTCAC CCTGTTCCAC TGGACGCTGC ACCCGTGGGC GATCTACGCG
GTGGTGGCGC TCGCCCTGGC GTACTCGACC TTCCGCAAGG GGCGGGAGAA CCGGATCTCG
GCCGTGTTCC GTCCGGTGCT CGGCGACCGG GCGGACGGCG CGGCCGGACG GGTGATCGAC
CTGCTGGCGG TCTTCGCCAC GGTCTTCGGC ACAGCGACCA GCCTCGGGCT CGGCGCGCTC
CAGGTCACCG CGGGCCTGGA CCGGGTCGCC GGGATTCCCG ACAGCACCAC GGCGGAGCTG
GTGGTGATCG GGGCGTTGAC CCTGGCCTTC GTCGTCTCGG CCTTCTCCGG GCTGTACCGG
GGCATCAAGT GGCTGTCCAC CACCAACGTG GTGCTGGCGG TGCTGCTGAT GCTGTTCGTC
TTCGTGGTCG GCCCGACGGT CTACGTCCTG GATGTGCTGC CCGCCTCGAT CGGCGACTAC
GTCAGCAACC TGGTCTTCAT GTCGACGCGG ACCGGGGCCT TCTCCGACCC GTCCTGGTTG
GGCTCCTGGA CGATCTTCTA CTGGGCGTGG TGGATCTCCT GGGCCCCGTT CGTCGGTACC
TTCATCGCCC GCATCTCCCG TGGTCGTACG GTGCGCCAGT TTCTGGTCGG CGTGCTGCTG
GTGCCCAGCG GGGCCAGTGT GGTCTGGTTC GCGGTGATGG GCGGCAGCGC GCTGCGGGTG
CAGGCCACCG GCACCCGGGA CCTGGTCGCC GAGGCCGCCG CCGGCGCCGA CCAGGCACTC
TTCGGGTTGC TCGACGCGTT GCCGCTGGGC GCGCTGACCA GTGTGCTGGC CATGGCGCTG
GTGATGCTCT ACTTCGTCAC CAGTGCCGAC TCCGCCTCCC TCGTGCTCGC GTCGCTGACC
TCCCGGGGCG CGTTGCGTCC GCGCCGGTTG CTCGTCGTCA CCTGGGGTGT GTTGATCGGT
GGGACCGCCG CGGTGCTGCT GCTGGCCGGC GGGCTGAACG CGCTCCAGCA GGCGACGATC
ATGGTCGCGT TGCCGTTCGT GGTGGTGATG CTCGGCCTGG CCGTGTCGTT GGTCAAGGAG
ATGTCCCAGG ACCCGGCGGT GCGGGTCCCC CCGCCCCAAC CGCACGGGCT GGCCGCCGCC
CTCCACCGGG CCCGCTCGAC CGAGGAGGAA CACTAG
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| Protein sequence | MDMGGSAGRP GSGSVDRLLL CLAVGGVLAV VAWGVLDRES VSAVGQTGLN WVITTFGWLF
VVAANAFLVL AVVLALSRFG TIRLGPDAER PEFSTLAWVA MMFSAGMGIG LVFFAVAEPI
QHYASPPPAT GVEPETGAAA SAAMQFTLFH WTLHPWAIYA VVALALAYST FRKGRENRIS
AVFRPVLGDR ADGAAGRVID LLAVFATVFG TATSLGLGAL QVTAGLDRVA GIPDSTTAEL
VVIGALTLAF VVSAFSGLYR GIKWLSTTNV VLAVLLMLFV FVVGPTVYVL DVLPASIGDY
VSNLVFMSTR TGAFSDPSWL GSWTIFYWAW WISWAPFVGT FIARISRGRT VRQFLVGVLL
VPSGASVVWF AVMGGSALRV QATGTRDLVA EAAAGADQAL FGLLDALPLG ALTSVLAMAL
VMLYFVTSAD SASLVLASLT SRGALRPRRL LVVTWGVLIG GTAAVLLLAG GLNALQQATI
MVALPFVVVM LGLAVSLVKE MSQDPAVRVP PPQPHGLAAA LHRARSTEEE H
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