| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3743 |
|---|
| Symbol | |
|---|
| ID | 5706271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 4285972 |
|---|
| End bp | 4287309 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641273163 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_001538527 |
|---|
| Protein GI | 159039274 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 124 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1614 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGCC GCCGGTATCC CACCATTAGC AAAGGCAGTG ACGGGTGGTT TCATGCCTGG
GTCACGGTGG GCACGAAGAG CAACGGGCGG CCCGATCAGC GGCACATCAA ACGGGCCACG
GTAGAGCAGG TAGAGACACG GATAGACGAG CTACTAGAGC AGGCCCGCAC TGCTACGGTC
CCGCGCGGCG GTCGCGGACC CACCGTTAAC ACCTGGCTGA TCAGTACCTA TCTGGAGACA
ATCGCCCCCG GAAAGATTGA TCCAACGACC GTCCAGGGCT ACCGGAGTAA GGTCACAAAT
TACGTTGTGC CAGTTATTGG TGCCCTTCGG ATGGATCGCG TAATAGCTGA TAACATCGAT
GCCGTTTACA CAGAGATGCG GCGTCGAGGT CTCGCTGATG CCACGGTACT ACAGGTCCAC
CGTATTCTTT CCCGCGCATG GAAAGTTGCC GCTCGGCGAC GTGTTGTGCC ACGAAACATC
ATGCTCGATG TCGACCCGCC AAGTGCAAAG CGTCAAGAGA TGGAACCGCT CACGGAAGAC
GAGGCTAAGG CGACGCTGGC GGCAGCCCAC CGACGCCGCA ACTCGGCCCG CTGGTCCGTC
GGGTTCGCGG TTGGCACCCG CCAGGGTGAG GCGCTCGGCC TACGTTGGCC GCACCTCCTC
GTAGAGTGCG ACGACTGCGG GGCAACGGTG AAGTTGGCGG ACTGGTGGGC CGGGCAACTG
GTGCAGTGCC GAGGCTGCAA CTCGGTGAAT GTCGGCGCCG TCGCCCGGAT CTGGTGGCAG
CTTCACCGGC GAGCGCACGA ACACGGCTGC GCTCCTCAGG CCCCATGGCC TTGTGGTCGA
CGTCGTGGCG GCAACTGCCC AAACAAACGA CTGGTCCTGC GATCGGGCGA GATTCACGTC
GGCGGCGGAC TGATTCTTAA GGAACCCAAG GGAAAGAGCA AGCGGACCAT TCCGATCCCG
CAGGAACTTG TCGATAGCCT CCGAGCGCAC TACGAAGTGC AGAACTTGGA GCGAATGGTG
GCTGAGGCTG CATACGCCTC GCATGGCTTC GTCTTCGCCG ACCAGCTCGG CGGCCCGATC
GACCCAGCCG AAGACTGGCG GGAGTGGAAG ACCCTAATCG CGGATGCCGG CGTACGGGAC
GCTCGGGTGC ATGACGGCCG GCATACTGCG GCAACGCTGC TTCTCGCTCA GGGAGTCGAC
ATCCGGGTGG TCCAGGAGCT GCTTGGGCAC TCCTCGATCA AGGTCACCGA GGGATACACC
CACGTCGCCT CGAAGCTGGC CCGGGACGCT ACGGAGCGTA TGGGAAAGCG GCTGTTCGGA
ACGCCAGGTA CACCCTGA
|
|---|
| Protein sequence | MPRRRYPTIS KGSDGWFHAW VTVGTKSNGR PDQRHIKRAT VEQVETRIDE LLEQARTATV
PRGGRGPTVN TWLISTYLET IAPGKIDPTT VQGYRSKVTN YVVPVIGALR MDRVIADNID
AVYTEMRRRG LADATVLQVH RILSRAWKVA ARRRVVPRNI MLDVDPPSAK RQEMEPLTED
EAKATLAAAH RRRNSARWSV GFAVGTRQGE ALGLRWPHLL VECDDCGATV KLADWWAGQL
VQCRGCNSVN VGAVARIWWQ LHRRAHEHGC APQAPWPCGR RRGGNCPNKR LVLRSGEIHV
GGGLILKEPK GKSKRTIPIP QELVDSLRAH YEVQNLERMV AEAAYASHGF VFADQLGGPI
DPAEDWREWK TLIADAGVRD ARVHDGRHTA ATLLLAQGVD IRVVQELLGH SSIKVTEGYT
HVASKLARDA TERMGKRLFG TPGTP
|
|---|
| |