| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3672 |
|---|
| Symbol | |
|---|
| ID | 5707194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4234436 |
|---|
| End bp | 4235203 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641273094 |
|---|
| Product | Na-Ca exchanger/integrin-beta4 |
|---|
| Protein accession | YP_001538458 |
|---|
| Protein GI | 159039205 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0168483 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGGC TGGTTGCGGT CAGCGCAACA CTGGTCCTGG CGATGACCAC CATTTCGGTT
GGTCCGGCTG CCGCGGACGA CATCTGTTCG CCGCGCAGCA TTGGCGTAAG CGACGCCACG
CAGTTCGAGG GCGGGTTCTT CCCGGCGGAG ATCACGTTCA CGGTGACGTC GGTCGGCTGC
GCGGGGGGAA CCGTCCAGTT TGCGACGGGG GTCGACCCCG GTGGCGCGAT GCCGATGGCT
GAACCCGGAC TCGACTACAC GCCTGTGTTC GGTGAGTTCT CCTGGCTACC GGGTGAAACC
ACCAACCACA CCGTTGTCGT GGACATTGTG AGCGACTACG GAATCGAGCC GGACGAGGTG
TTCACGCTAG AGCTGTTCAA CCCAATCGGG CTGGTCATTG TCGACCCGAT CGGTCTGGGT
ACGATCCGCA ACGACGACGT CACGATCACG CCCCTTGGCA AGCCACATTG CCTGGAGTCA
TATCTCAGCT GCCGGCTGAG CGTGCTCGTA TCGGAGCCGG CACCGGTCGA CCTGACCATC
CACTTCGCCA CCCAGAATGG TACTGCGACG GCCGAATCGG ACTACACCGG AATCTCCAAC
GGGGAACTCA CCATACCGGC CGGGGCATCA ACAGCGGAGC TGAGTATTCC GATCCGGGAC
GACCGGGAGG TGGAGGGCGA CGAATACTTC TACGTACACC TCTACGCACC CTCGAACGGG
AAGATCACCC AGGATCAGGT GGCCATGGGC ATCGTCGACG ACGACTGA
|
|---|
| Protein sequence | MTRLVAVSAT LVLAMTTISV GPAAADDICS PRSIGVSDAT QFEGGFFPAE ITFTVTSVGC
AGGTVQFATG VDPGGAMPMA EPGLDYTPVF GEFSWLPGET TNHTVVVDIV SDYGIEPDEV
FTLELFNPIG LVIVDPIGLG TIRNDDVTIT PLGKPHCLES YLSCRLSVLV SEPAPVDLTI
HFATQNGTAT AESDYTGISN GELTIPAGAS TAELSIPIRD DREVEGDEYF YVHLYAPSNG
KITQDQVAMG IVDDD
|
|---|
| |