Gene Sare_3633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3633 
Symbol 
ID5703327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4192025 
End bp4192387 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content67% 
IMG OID641273058 
Productanti-sigma-factor antagonist 
Protein accessionYP_001538422 
Protein GI159039169 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.786299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000658769 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCCTGT CGATCGTGAA GTCGGTCCTA CCCGGGAGCG TCACCGAGAT CTCGCCGCGC 
GGTGAGATCG ACGTTGACAC TGCCTACGAG GTGCGTGAGG CGGTCGCTGA GGTCTTGGCG
AAAGGCCGTC CCCGCCGCAT CGAACTGAAC ATGCGCCTGG TGACCTTCAT CGACTCCGTC
GGCATCAGCG CGATGGTCGC CGGCTTCCAG ACCGCCGAGG TGAGCGGCGT GAAACTGGTG
GTGACCGAGC CGAGCCGGTT CGTGCACCGG CAGCTCTGGG TTGCTGGACT GCTCGGCCTC
TTCGGTGCCC CTGATCCCTA CGTCGCGGGG TCTGCGGCCC CAGAGGTCCT GCCGGGCGCC
TGA
 
Protein sequence
MSLSIVKSVL PGSVTEISPR GEIDVDTAYE VREAVAEVLA KGRPRRIELN MRLVTFIDSV 
GISAMVAGFQ TAEVSGVKLV VTEPSRFVHR QLWVAGLLGL FGAPDPYVAG SAAPEVLPGA