Gene Sare_3632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3632 
Symbol 
ID5703326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4190890 
End bp4191933 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content69% 
IMG OID641273057 
Producthypothetical protein 
Protein accessionYP_001538421 
Protein GI159039168 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.960299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000777335 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCGGCCC TGATCATCGT GGCGCTCACC CTCGGTGCCG GCCTCGCCCC GGCAGGCCCC 
GCGGTCGCCG CTTCCCCCGC CCGCCAGGCC CCCGCGACCG AGAACGACCC GGAGGGCGGC
ACCCCTGCAT TACGCGACCA ACTCGAGGCG GCCAGTAAGG GATACCTGGA CGCCAAACAG
GCTCTGGCGA ATTCGTTGAA GCGGCAGCAG CAACTCGCCA CCCAACTCAA GACCACCGAA
GCCCAGCACG CCGAACGCGC CTCGCGGGTC GAGCAGCTCG CCGGACTGGC ATACCGCACT
GGTCCACTTC GAACGGCGTC GGCGCTACTC AACAGCGAAT CACCCGCGAG CTTCCTGGAC
CGCGCCAACG CCTTGGAGGT GGTGGTCGCC AACGAGGACC AGGCCATACA CGAGCTACAT
GAGACCCGGG ATCAGATCAA CCGGTCCACG CGCGCGGTCG AGGTCGAGAT CGTCGAACAG
CGTAAGCAGC AGGCCGTGAT GGCCAAGCGC AAGCAGCAGG CCGAAAAGGC GCTGGCGGTG
GCGGTGGCCA ACGAGCGGGC CCGCGCCGCC GCCGCTGCCT CCACCACCCC CACCACCACC
CAGAACTCGA CCAAGGCGAC CCCCGCCCCC CGCAACCCGG ATGGCTCCTG GCCGGCCGAG
ACGTGCAGCG TCAACGACCC CACCCCAGCG AACGGCTGCA TCACCCCACG TACGCTGCAC
GCACTCAACC AGGCCAAAGC CGCCGGCTTC ACCCGCTATG TGTCGTGCTT CCGCTCCGGC
GGCTCGGGCG AGCACCCGAA GGGCCGAGCC TGCGACTTCG CCGCCCAGAA GGACGGCTTC
GGCGGAGCCG CGACTGGCGG CGACCGGACA TACGGCAACA ACCTGGCGGC GTTCCTGGTG
GACAACGCCG ACCGACTCGC GGTGCTCTAT GTGATCTGGT ACCGACAGAT CTGGCTGCCC
AGCAGCGGGT GGAAGTCGTA CAGCGGGGCG GGTGGCGACC CGTCCAGCGA CCACACCAAC
CACGTACACC TGTCCGTCTA CTGA
 
Protein sequence
MAALIIVALT LGAGLAPAGP AVAASPARQA PATENDPEGG TPALRDQLEA ASKGYLDAKQ 
ALANSLKRQQ QLATQLKTTE AQHAERASRV EQLAGLAYRT GPLRTASALL NSESPASFLD
RANALEVVVA NEDQAIHELH ETRDQINRST RAVEVEIVEQ RKQQAVMAKR KQQAEKALAV
AVANERARAA AAASTTPTTT QNSTKATPAP RNPDGSWPAE TCSVNDPTPA NGCITPRTLH
ALNQAKAAGF TRYVSCFRSG GSGEHPKGRA CDFAAQKDGF GGAATGGDRT YGNNLAAFLV
DNADRLAVLY VIWYRQIWLP SSGWKSYSGA GGDPSSDHTN HVHLSVY