Gene Sare_3620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3620 
Symbol 
ID5708167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4177138 
End bp4178307 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content73% 
IMG OID641273045 
ProductAcyl transferase 
Protein accessionYP_001538409 
Protein GI159039156 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000683569 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCTCGCCG TACTCTCCCC CGGCCAGGGT TCCCAGAAAC CCGGCTTCCT GACCCCCTGG 
CTCGATCTGC CCGGCACCGA GGCGCGGCTG CGCTGGTGGT CCGCGCTCGC CGGGGTCGAC
CTGGTACACC TCGGCACGGC CGCGGACGCC GACGAGATCA AGGACACCGC TCGCACCCAG
CCGCTGCTCG TCGCGGCGGC ACTACTCGCC GCCGAGCACC TGCCGATGCA CGACGTCACG
CTCACCGCCG GCCACAGCGT CGGTGAGCTG GGCGCGACGT CACTCGCCGG TGTCCTCACC
CCGGAGGCCG CGGTCACGCT GGCCGCCGTC CGGGGCCGCG AAATGGCAGC CGCCTGCGCG
CTGGAGCCAA CCGGGATGGC GGCGATGCTC GGTGGTGATC CCGACGAGGT GCTCGCCGCG
ATCGACGCAC ACGGGCTCCA CCCGGCCAAC CGCAACGGCG CCGGCCAGAT CGTCGTCGCC
GGTTCACTGG CCGGACTGGA CAAACTCGCC GCCGAACCGC CGGCCCGCAC CCGCGTCGTC
CGGCTGAAGG TGGCCGGCGC CTTCCACACG CCGTACATGG CATCGGCCGA GACCGCTCTG
GCCGCCGTCG CAGCCGGCGT GACCCCCGCC GACCCGACCC ACATCCTGCT GTCGAACCTC
GACGGCGCCG CCGTCAACCA CGGCCGGGAG ATGGTGCAGC GGCTGATCCG CCAGATCACC
GCCCCGGTCC GCTGGGACCT GTGCCTGCGC ACGCTCGCCG ATCTCGGCGT GACCGGAGTG
ATCGAACTAC CCCCGGCCGG CGCCCTCGCC GGCCTGGTCA AACGAGAACT GAAGGGCGAT
GCCGCCCCGG AGATCGTCAC TCTCAACACC CCGGACGACC TGCCCGCCGC ACGGGACCTG
ATCGCCCGAC ACAGCGGCCT CGGTGGCCAC GAGCCGGTCA TCCAGTTCCG GGTCGTGGTC
TCTCCCGCCG CCGGCACCTT CACACCCGTC GACGGGCTGG CCGAGGGCGT TGACCTACGC
GCTGGCCAGA TCATCGGTCA CATCGCCACC CGGCAGGGCT CCGTCGAGGT CACCGCCCAC
GACAGCGGGC TACTCACCGA GTGGCTCGCC CATCACGACG ACCCGGTGGC CCCGGGCCAG
CCGCTGGCCC GAATCGGCGG CCACACATGA
 
Protein sequence
MLAVLSPGQG SQKPGFLTPW LDLPGTEARL RWWSALAGVD LVHLGTAADA DEIKDTARTQ 
PLLVAAALLA AEHLPMHDVT LTAGHSVGEL GATSLAGVLT PEAAVTLAAV RGREMAAACA
LEPTGMAAML GGDPDEVLAA IDAHGLHPAN RNGAGQIVVA GSLAGLDKLA AEPPARTRVV
RLKVAGAFHT PYMASAETAL AAVAAGVTPA DPTHILLSNL DGAAVNHGRE MVQRLIRQIT
APVRWDLCLR TLADLGVTGV IELPPAGALA GLVKRELKGD AAPEIVTLNT PDDLPAARDL
IARHSGLGGH EPVIQFRVVV SPAAGTFTPV DGLAEGVDLR AGQIIGHIAT RQGSVEVTAH
DSGLLTEWLA HHDDPVAPGQ PLARIGGHT