Gene Sare_3502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3502 
Symbol 
ID5703311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4041852 
End bp4042646 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content75% 
IMG OID641272929 
Producthypothetical protein 
Protein accessionYP_001538295 
Protein GI159039042 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00147074 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGGGGGT GGGAGTGGGG CCGGCCGGTC CGTCCGGTCC GGCGCGAGGT GCTCGATGCC 
GTACCAGGGC TGGATGATGG TCGCCCACCG CTGTTGTTCG TGCCCGGATT TGGTCACGGA
GCGTGGGCAT TCGCGGAGCA CTGGCTGGGG CACGCTGCCG CGCGCGGCTT TCCTGCCCAC
GCGTTGAGCC TGCGGGGCCA GCCCGGCAGC GATCCTGCGC CGGAGGCCAC CCTGCGGGCG
TACGCCCATG ACGTGGTGCA GGTGGCTGCG AGCCTGCCCC GCCAGGCGGT GCTGGTCGGG
CACGGCGCCG GGGCACTGGT GGTCGCACAC GCGCTGGCGC GTTACCCGGC CCGCGCTGCC
GTGTTGGTGG CACCGGTGTT CGGCGGTTGG GGAACCGCGC TGGCGGCGCT GCGCCGCAAC
CCCCTGGGTA CGCTGCCCGC GTTGTTCGGT GGCCGGCTGC GGGTGAGCCG CGCCCAGCTG
TTCGGCCGGG AACTGCCCGG TGAGGACGCG CGGCGGCACC TGGCCCGGTT GGGCCATCCC
GCCCGGCGCG CCCAGTGGCA GCTGCTGTTC GGCCGGGAGC CGGAGCCGGC GGTGGGGGAT
CCGCCGGTGC TGGTGCTCGG GAGCCCGGAT GACCGGATAC TGCCGGGGCT GGCGCTGACC
CGGGCCGCCC GCCGGTACGG CTCGGCCCCG CTGCTCTTCC CCGGTATGGG GCACGATCTG
ATGCTGGACG CTCGGTGGCG GGAACCGGTC GATGCGCTCC TCGACTGGTT GGAGAAGGAA
CCGTCCCGCG GCTGA
 
Protein sequence
MRGWEWGRPV RPVRREVLDA VPGLDDGRPP LLFVPGFGHG AWAFAEHWLG HAAARGFPAH 
ALSLRGQPGS DPAPEATLRA YAHDVVQVAA SLPRQAVLVG HGAGALVVAH ALARYPARAA
VLVAPVFGGW GTALAALRRN PLGTLPALFG GRLRVSRAQL FGRELPGEDA RRHLARLGHP
ARRAQWQLLF GREPEPAVGD PPVLVLGSPD DRILPGLALT RAARRYGSAP LLFPGMGHDL
MLDARWREPV DALLDWLEKE PSRG