Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3490 |
Symbol | |
ID | 5704761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4025538 |
End bp | 4026500 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641272917 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001538283 |
Protein GI | 159039030 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.32556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0478454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGCGG TCATTGGTGA GGCACTGGTC GATCTGGTCG CGGAGGATAC GTCTGGTGGC TACCGTGCTG TACCCGGCGG TTCACCGGCC AACGTCGCGC TCACCCTGGC CCGGCTCGAG CAGCCGGTTC GGCTGCTCGC CCGGCTCGGT AGCGACGGTT TCGGTCAGCG AATCCGCGGC CACCTCCACC AGAACGGAGT AGATCTGAGC TGGGCGGTCC CCGCCGCCGA GCCGACCTCG CTGGTAGTAG CCACGCTCGA CGACTCCGGC CAGGCCACCT ACCAGTGCTA CCTGGGCGGG ACCGCCGACT GGCAGTGGAC CGCGGACGAA CTGCCGGACC TCACCGGAAC CGGGATCACC GCGCTGCACA CCGGGTCACT GGCGCTCGCC CTGCCACCTG GCGCGGCGAT CCTCGAGGAC CTCTTCGATC GGGAGAAGCG CCGAGACGCC CGCACCCTGT CGATCGATCT CAACCTGCGC CCGACCATCG TTCAGGACCG CGACGGCGAG CAGCGGCGGG TCGAGCGGCA GGTGCACACC GCACACATCG TGAAGGCAAG CGAGGAGGAC CTCGACTGGC TCTACCCGGA CCGCACCATT GATCAGGTCA TGGCCGAATG GCGGGCGGCT GGGGTGGCCT GTGCGGTGGT GACCCGCGGC GCCGCCGGCA GTTGTCTGCT CGCGCCGGAC GGGCGGCTGT ACCAGCAGTC AGCGAGGCAG GGCGATGTGG TCGACACCGT TGGTGCTGGC GACGCCTTCA CCGGGGGCTT GCTCGCCGCG CTCGCTGACT TCGGTGCGCT CGGTGACCAG CCCGGCGCCC GCCTCGCCGC CGTTACGCCG AGTCAGTGGC GCCAAGGGCT TGACCAGGCC AGCACCGTTG CCGCGCTCAC CTGTGCCCGG CGGGGTGCCG ATCCACCCAC GCTCGCCGAT GCTGTCGCGG TGCCGACCAC GGGGCCGGCG TAG
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Protein sequence | MIAVIGEALV DLVAEDTSGG YRAVPGGSPA NVALTLARLE QPVRLLARLG SDGFGQRIRG HLHQNGVDLS WAVPAAEPTS LVVATLDDSG QATYQCYLGG TADWQWTADE LPDLTGTGIT ALHTGSLALA LPPGAAILED LFDREKRRDA RTLSIDLNLR PTIVQDRDGE QRRVERQVHT AHIVKASEED LDWLYPDRTI DQVMAEWRAA GVACAVVTRG AAGSCLLAPD GRLYQQSARQ GDVVDTVGAG DAFTGGLLAA LADFGALGDQ PGARLAAVTP SQWRQGLDQA STVAALTCAR RGADPPTLAD AVAVPTTGPA
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