| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3486 |
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| Symbol | |
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| ID | 5703549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 4020923 |
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| End bp | 4022254 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641272913 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_001538279 |
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| Protein GI | 159039026 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0571528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACCG TGTCCGCACT CAGCGTTAAA TCTCTGTACA AGGTTTACGG GAACCGCCCC
GACAAGGTGG TCGACCTTCT CCGGGACGGT ACCCACCAGG ACGAGAAGCT GGCCGGCATC
TCGGCCACAG CGGCCGTCGT CGACGCGAAC TTCGAGGTCA AGCGTGGCGA GATCTTCGTT
GTCATGGGCC TGTCCGGATC GGGGAAGTCA ACCCTCATCC GGATGCTCAA CGGACTCCTG
AAGCCCACGC ACGGCACCGT CGAGGTGGAC GGGGTCGACC TCACGAAACT CAAACCCACG
GCGCTGCGAA AGCTACGCCG CGAGAAGATC AGCATGGTCT TCCAGCACTT CGCGCTGCTA
CCGCACCGGT CCGTCCTGGC CAACGCCGGT TACGCGCTGG AGGTGGCGGG CCTGCCCCGG
GATGAGCGCC GCGAGCGGGC CCTCCAGGCA CTGCGGATGG TCGGCCTGGA CGCCTGGGCG
GACAAGCTGC CGCAGGAACT GTCCGGCGGC ATGCGCCAGC GTGTCGGCCT GGCCCGCGCA
CTCGCCGCCG GCACCGACAT CATGCTCATG GACGAGGCGT TCTCCGCCCT CGACCCGCTC
ATCCGCCGCG AGGTCCAGGA CCAGCTGCTC GAGCTACAGG CCGAACTCGG CAAGACGATC
GTGTTCATCA CCCACGACCT CAACGAGGCG ATGCGCCTCG GAGACCGGAT CGCGGTCATG
CGGGACGGCC GGATCGTCCA GATCGGTACC GCCGAGGAAA TCCTCACCGC TCCGGCCAAC
GACTACGTCG CCCAGTTCGT CGCCGACGTC GACCGGACCC GGATTCTCAC CGCGTCATCG
GTCATGGAAC GGCCATCCGG CGTCGTCGAC GTGAACGCCG GTCCGCAGGT GGCCACCCGC
GTGCTGCGTG AGACCCAGGC CTCAGCCATC TACGTCGCCG GGCCGGACGA CAGGTACCTC
GGTACGGTGA GCGCCGACGC CGCCACCACT GCCGCCCGCG ACGGCGGGAA GAACCTTCAG
GGGATCGTCT CGACCGAGGA TGTCCAGACC GTCGCCGAAG ACACTCCCGT CGCCGAGCTC
TTCGCGCCCT GTGCGACCAG CCGACATCCG GTCGCCGTCG TCGACGACAC CGGGCGACTG
ACCGGGGTGG TCTCACAGGT GGCACTCCTC AACGCCCTGG GCAACCTCGG CGTCGAGAAC
GGCGACCGGG GCCAGTCGCC CCCGGCGGTG GGCACGGAGC CCGCGTCCGC CGGAGCGGGC
GCCGCCACCT CGGCGGTAGC GGCGCAGCGG GTGGCCGCAC AACCGGTCCG GCTGAAGGAG
GATCCCGCAT GA
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| Protein sequence | METVSALSVK SLYKVYGNRP DKVVDLLRDG THQDEKLAGI SATAAVVDAN FEVKRGEIFV
VMGLSGSGKS TLIRMLNGLL KPTHGTVEVD GVDLTKLKPT ALRKLRREKI SMVFQHFALL
PHRSVLANAG YALEVAGLPR DERRERALQA LRMVGLDAWA DKLPQELSGG MRQRVGLARA
LAAGTDIMLM DEAFSALDPL IRREVQDQLL ELQAELGKTI VFITHDLNEA MRLGDRIAVM
RDGRIVQIGT AEEILTAPAN DYVAQFVADV DRTRILTASS VMERPSGVVD VNAGPQVATR
VLRETQASAI YVAGPDDRYL GTVSADAATT AARDGGKNLQ GIVSTEDVQT VAEDTPVAEL
FAPCATSRHP VAVVDDTGRL TGVVSQVALL NALGNLGVEN GDRGQSPPAV GTEPASAGAG
AATSAVAAQR VAAQPVRLKE DPA
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