Gene Sare_3466 details

Gene Information

• Locus tag: Sare_3466
• Symbol: dnaE2
• ID: 5708068
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salinispora arenicola CNS-205
• Kingdom: Bacteria
• Replicon accession: NC_009953
• Strand: -
• Start bp: 3996723
• End bp: 4000097
• Gene Length: 3375 bp
• Protein Length: 1124 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 641272893
• Product: error-prone DNA polymerase
• Protein accession: YP_001538259
• Protein GI: 159039006
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0587] DNA polymerase III, alpha subunit
• TIGRFAM ID: [TIGR00594] DNA-directed DNA polymerase III (polc)

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.14636
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 5
• Fosmid unclonability p-value: 0.00222326
• Fosmid Hitchhiker: No
• Fosmid clonability: decreased coverage

Sequence

Gene sequence

ATGAGCTTCC ACAATCCGGA TCTGCCGTGG TCGGAACTGG AGCGGGTGCT CACCGGTAGA 
CCCGCCCGGG GCCAACGCCG CACCCAGGAC GGTGAGCGGC ACCTGCACGT GGTGGACCCG 
CTGGCGGTGG ACGCCGACGG CGGAGATGCT GCCGCGTGGG CCGGCAAACG TCAGCACCGT 
ACGCCGCCCG CGGTGAGCCG CCCGGATGAT GCGGTGCCGT ACGCCGAGCT GCACACGCAC 
ACCAACTTCA GTTTCCTCGA CGGGGCCAGC CACCCGGAGG AACTGGCCGA GGAGGCCACC 
CGGCTGGGAC TCACCGCTCT CGCGGTGACC GACCACGACG GCTTCTACGG CGTGGTGCGC 
TTCGCCGAGG CGGCCCGCGC CCTGCACCTG CCGACGATCT TCGGCGCGGA GCTCTCCCTC 
GACCTGCCCG GCCCACCCAA TGGTGAGCCG GATCCGCTCG GGCGGCACCT GTTGCTGCTC 
GCCCACGGCC ACGAGGGGTA CGCCCGGCTG GCCGCCACCA TCTCCCGGGC CCAGCTGCGC 
GGCGGGGAGA AGGGCCGCCC GGTCTACGGA GAGCTGGCGG AGGTCGCGGC CGAGTTGCGT 
GACCATGTGC TGGTGCTCAC CGGCTGCCGC AAGGGCCACG TGCCAGCCGC GCTGCTCACC 
GAGGGCGTTG ACGCGGCAGC CCGGGAACTG GACCGGCTGA CCGCGCTGTT CGGCGCGGAG 
ACGGTCGCGG TGGAGTTGAC CGACCACGGC CACCCGGTCG ACGCCGACCG CAACGACGCC 
CTCGCCGAGC TGGCGGATGC CGCCGGGTTA CCGACGGTGG CTACCAACAA CGTGCACTAC 
GCCACTCCGG GACGGCGCCG GCTGGCCACC ACACTCGCCG CGGTTCGGGC CCGGCGTAGC 
CTGGACGAGA TCGATGGCTG GTTACCCGCC GCCGGCACCG CCCACCTGCG GAGCGGTGCC 
GAGATGGCGG CCCGGTTCGC CGCGTACCCA GGGGCTGTGG CCCGGGCCGC CGAGTTCGGT 
GCGGAACTCG CCTTCGACCT GCAACTCGTC GCCCCAGCGC TACCGGCCTA TCCGGTTCCG 
TCCGGGCACA CCGAGATGAG CTGGCTGCGT CACCTCACGG CGCGGGGGGC ACGAGAACGC 
TACGGCCCGC CGGAGGCGCA CCCCGAGGCG TACGCGCAGC TGGAGCACGA GCTGAACATG 
ATCGAGGAGC TGGGCTTTCC CGGCTACTTC CTGGTGGTCT ACGACATCGT CACGTTCTGC 
CGTGAGCAGG ACATCTACTG CCAGGGTCGG GGGTCGGCGG CGAACTCGGC GGTCTGCTAC 
GCCTTGCGGA TCACCAACGT CGACGCGGTC CGTCATCGGC TGCTCTTCGA GCGCTTCCTC 
GCCCCGGAGC GGGACGGGCC GCCGGACATC GACGTGGACA TCGAGTCCCA CCGCCGGGAG 
GAGGTCATCC AACACGTCTA CGCCCGGTAC GGGCGGGAGC ACACCGCCCA GGTCGCCAAC 
GTCATCTCGT ATCGGCCCCG GTCGGCGGTG CGGGACGTGG CGAAGGCGTT CGGGTTCTCC 
CCGGGTCAAC AGGACGCCTG GAGCAAGCAG GTCGACCGGT GGGGCTCGGT TGCCGAGGTC 
GATGCCGAGG GCATTCCCGA ACCGGTGGTG GCGTACGCCG ACGCGGTGCA GACCTTCCCG 
CGGCATCTGG GCATCCACTC CGGCGGCATG GTGATCTGCG ACCGTCCGGT GATCGAGGTG 
TGCCCGGTGG AGTGGGGGCG GATGCCCGGC CGGAGCGTGC TCCAGTGGGA CAAGGACGAC 
TGTGCCGCCG TCGGGCTGGT CAAGTTCGAC CTGCTCGGTC TCGGCATGCT CGCCGCGTTG 
CACCACGGCT ACGACATGAT CGGGACCCGG CTCGAGCTGG GCGACATGAC CCTGGACGAT 
TCCGAGGTCT ACGACATGCT CTGCCGGGCG GACGCGGTCG GGGTGTTCCA GGTGGAGAGC 
CGTGCCCAGA TGGCTACCCT GCCCCGGCTC AGACCCCGCT GCTTCTACGA CCTGGTGGTG 
GAGGTGGCGC TGATCCGGCC CGGCCCGATC CAGGGCGGCT CGGTGCATCC GTACATCCGG 
CGTAAGAACG GCCAGGAGCC GGTCACCTAC CCCCATCCGC TGATGCGCAA CGCGCTGGAG 
AAGACCTTGG GCGTGCCGCT GTTCCAGGAG CAGCTCATGC AGCTCGCCAT CGACCTGGCC 
GGCTTCGACG CGGCCGAGGC GGATCAGCTG CGTCGGGCGA TGGGGGCAAA GCGGTCGGTG 
GAGCGGATGG CCCGGATCGC CGACCGGCTC TACGCCGGTA TGGCCGAGCG GGGTATCACC 
GGTGAGCTGG CTGACGACGT CTACCGCAAG CTCACCGCGT TCGCCAGCTA CGGTTTCCCG 
GAGAGCCACG CGATGAGCTT TGCTTACCTG GTCTACGCCA GTTCCTGGCT CAAGCGGTAC 
CACCCGGCAC CGTTCCTGGC CGCGCTGCTC AATGCCCAAC CGATGGGGTT CTACTCGCCG 
CAGACTCTGG TCGATGACGC CCGCCGGCAC GGGGTGGAGG TCCGCCGGCC AGACGTCAAC 
GCCAGCGGTG CCGGAGCGGT CCTGGAGTCC ACCCCGAACA CTCGGTGGGG GAGCCAGCCG 
GGGGAGCCGC CGCACGCGTG GGGGCTTGGC GGTCCGGCGG TCCGGCTCGG GCTGGACGGC 
GTGCGTGCCC TCGGTGCGGA GGTGGCCGAG CGGATCGTGG CCGAGCGGAC GGCGCATGGG 
CTGTATCAGG ATATGTCGGA TCTGGCCCGG CGTGCCGGTC TCACCGCCGC ACAACTGGAG 
GCGCTCGCCA CCGCGGATGC CTTCGCGTGC TTCGGTGTGA CCCGACGACA GGCGCTCTGG 
GCCGCCGGGG CGGCGGCCCA GGACCGCCCC GACCGTCTGC CCGGTACCGT GCCCGGCACG 
GTCGCACCGA CGCTGCCCGG GATGGCGGCG GTCGACCGTC TCGTCGCGGA TGTGTGGGCG 
ACCGGGTTGT CGCCGGAGAG TCACCCGGCC CGTTTCATCC GGGACCAACT CGACGCCCTG 
GGGGCGGTAC CGATCGACCA GCTCGCGCGG GTGGAGCCGG GTCGGCGGAT TCGGGTCGGC 
GGGATCGTCA CCCACCGGCA GCGTCCGGCG ACCGCGGGTG GGGTCACCTT CCTCAACCTG 
GAGGACGAGA CGGGGATGCT CAATGTCACC TGTTCCCCCG GGCTGTGGCA GCGCTACCGG 
CAGGTGGCGA AGAGCAGTGG GGCGCTGGTG GTCCGGGGTC TCCTCCAACG GTACGACGGA 
GTGATCAATC TCATCGCTGA CCGGTTGGAC CCGATTGATC TCCAGGTTCG TCTGGCCGCT 
CGCGACTTCC GTTGA 

 

Protein sequence

MSFHNPDLPW SELERVLTGR PARGQRRTQD GERHLHVVDP LAVDADGGDA AAWAGKRQHR 
TPPAVSRPDD AVPYAELHTH TNFSFLDGAS HPEELAEEAT RLGLTALAVT DHDGFYGVVR 
FAEAARALHL PTIFGAELSL DLPGPPNGEP DPLGRHLLLL AHGHEGYARL AATISRAQLR 
GGEKGRPVYG ELAEVAAELR DHVLVLTGCR KGHVPAALLT EGVDAAAREL DRLTALFGAE 
TVAVELTDHG HPVDADRNDA LAELADAAGL PTVATNNVHY ATPGRRRLAT TLAAVRARRS 
LDEIDGWLPA AGTAHLRSGA EMAARFAAYP GAVARAAEFG AELAFDLQLV APALPAYPVP 
SGHTEMSWLR HLTARGARER YGPPEAHPEA YAQLEHELNM IEELGFPGYF LVVYDIVTFC 
REQDIYCQGR GSAANSAVCY ALRITNVDAV RHRLLFERFL APERDGPPDI DVDIESHRRE 
EVIQHVYARY GREHTAQVAN VISYRPRSAV RDVAKAFGFS PGQQDAWSKQ VDRWGSVAEV 
DAEGIPEPVV AYADAVQTFP RHLGIHSGGM VICDRPVIEV CPVEWGRMPG RSVLQWDKDD 
CAAVGLVKFD LLGLGMLAAL HHGYDMIGTR LELGDMTLDD SEVYDMLCRA DAVGVFQVES 
RAQMATLPRL RPRCFYDLVV EVALIRPGPI QGGSVHPYIR RKNGQEPVTY PHPLMRNALE 
KTLGVPLFQE QLMQLAIDLA GFDAAEADQL RRAMGAKRSV ERMARIADRL YAGMAERGIT 
GELADDVYRK LTAFASYGFP ESHAMSFAYL VYASSWLKRY HPAPFLAALL NAQPMGFYSP 
QTLVDDARRH GVEVRRPDVN ASGAGAVLES TPNTRWGSQP GEPPHAWGLG GPAVRLGLDG 
VRALGAEVAE RIVAERTAHG LYQDMSDLAR RAGLTAAQLE ALATADAFAC FGVTRRQALW 
AAGAAAQDRP DRLPGTVPGT VAPTLPGMAA VDRLVADVWA TGLSPESHPA RFIRDQLDAL 
GAVPIDQLAR VEPGRRIRVG GIVTHRQRPA TAGGVTFLNL EDETGMLNVT CSPGLWQRYR 
QVAKSSGALV VRGLLQRYDG VINLIADRLD PIDLQVRLAA RDFR