| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3460 |
|---|
| Symbol | |
|---|
| ID | 5708209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 3990006 |
|---|
| End bp | 3992474 |
|---|
| Gene Length | 2469 bp |
|---|
| Protein Length | 822 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641272887 |
|---|
| Product | transglutaminase domain-containing protein |
|---|
| Protein accession | YP_001538253 |
|---|
| Protein GI | 159039000 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0458672 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCCA AGCGGAACCT GGGCCTGGTC GCCGCCGCCG CGACACTGCT CGCCGCGGCA
CCGCTGTCGG CCATCTTCGA CCGCTGGACG TGGCTGGTCC AGTCGGCCAT CACCGTCGCG
GTGGTGGCCG CGGTGGCCGC CCTGGCCCGG CTGGGACGGA TCCCGCTGTG GGGGCAGGTG
CTGGCCATGC TCGGCGGCCT GGTGCTCGCC CTGACCTGGC TGTTTCCCTC CGGCGCCGAG
CTGCTGGGCG TGGTGCCGAC CCCGTCCACC GTCGGGCATT TCGGGAGTCT GGCCGAGGCG
TCGCTGGTGG ACATGCGCTC CTACGGAGTG AAGGTGCCGG ACACCGACCC GATGCTGTTC
CTCGCTGTGC TCGGCGTCGG CGGGGTCGCC GTGCTGGTCG ACCTGGTGGC GGTCGAGTTA
CGCAAGCCGG CGCTGGCAGG CCTGCCGATG CTGGCCATCT ACTCGGTCCC GGTGGCGGTC
TACGTGGACA GCGTCCCCCC GGCGCCCTTC ATCATCGGCG CGGCCGGCTA CCTGTGGCTG
CTGGTCGCCG ACAACGTCGA CTGCGTCCGC CGGTTCGGCC GACGCTTCAC CGGCGACGGC
CGGGGCGTGG ACGTGTGGGC GGCGTCCCCG CTGTCCTCTG CTGGTCGACG GCTCGCGGCA
GTGGGGGTCG TGGTCGCGGT CGTGCTGCCG CTGGCGGCGC CGGGGATGGC CGGCGGTCTG
CTCGACACGA TCGGTTCGGG CACCGGGGAG GGCACGGGCG GATCGGGCCG GGCCACCAAC
GGTCGGGTCG ACCTGTTCTC CGCGCTCACC GGTCAACTCA ACCAGAACGA GGTCACCGAC
ATGGTGAAGG TGACCACCGA CGAGTCGTCC CCCTTCTACC TACGGTTCGG CGTCGCCGAC
CAACTGCGTA CCGATGGCTT CCGGGCGCGG GCCCCCAGTG GCTCGTCGGC CAGCCGGGAG
CTGCGCCCGG CCGAGCCGGA CCGGGAGGGG ATCGAACGCA CCCGTTACCG GGCGACGGTC
GAGGTGATGG AGAGTTTCGA GATGCCGCTG CTTCCGGTGT ACGCCGAGCC GGTGCGGATC
CAGGGCCTGA ACGGCAAGTG GTTCTACGAC ACGAACCAAC AGGTCCTGTT CTCCAACCGG
GAGCGTTCGT CGGGCAAGCG CTACGAGTTC GAATACGTGC GGTCGACCTA CTCCCCGTCG
GCGCTGCGGC AGGCCCGCCC ACTCCCGGCC GAACACAGCC TGCGTCGGCA GATGAGCACT
CCGACGGTGC CGGCGGTGGA GGCGCTGGTT GACGAGCTGA CCCAGGGACG TGACACCGAG
TACGACAAGG TGCGCGCCAT CTACGACCAT TTCGCCACCG AGAACGGGTT CAGCTATGCC
CTCAGCACCG AGGGGGGCAC CAGTGGTCAG GAGATCGTCG ACTTCCTGAC CAACAAGGTC
GGGTTCTGCC AGCAGTACGC CGCCGCGATG GCGTGGCTGG TCCGGGCGGC CGACATTCCG
GCGCGGGTCG CCTTCGGGTT CACCAACGGT GCCAACGTCG ACGGCGACAC CTACGTGCTG
ACCAACCGTA ACCTGCACGC CTGGACCGAG GTCTACTTCG ACGGGTTCGG CTGGGTGCCG
TTCGACACCA CGCCCGCGTA CGGCGTGCAG GGCGCCGCCC GGACTGCCTG GGCCCCCGAC
CTGGAAGCGG CGGAGGATGT CACACCGGAG CCGAACACGA CGGCGGGGCC AGCGGGGTCG
GATCCCACGA CGAACCCCAA CCAGCTGGAA GAAGGGCTGG AGGACGAGCT GTCCGGGCTG
CCGGGCGACA CCGGCACCCC CAACCGGCCC CTGCCGCTCT GGGTGTGGTG GGCCGCCGGG
GCACTGATCC TGCTCGTGCT GCTCGCCGTC CCGGCGCTGC GACGATCCCT CCTGCGCCGG
CGGCGTAGCG GCCGACGAGC GCCAGCAGCG GCGCCTGCCG GGACAGCCAC GGCGAACGCC
GTCGCGGCGT CTCCCGACGG GCGCCACATG GTGGTACTGG CCGACGCGGA CCGGGCACGG
GCCGATGCGC ACGCGGCCTG GGACGAACTG CTGGACACGT TGGTGGACTT CCGGCTGCGG
ATCGACCGGA CGGAGACCCC CCGCGCCACC GTCGGTCGGC TCACGAGGGA AGCGTTCCGC
GAGGACACCG AGGCCGCCTC GGCGGTACAG CTGCTGGGTC GAGCCGAGGA GCTCGCCCGG
TACGCGCGGG ATCCGCACTC CGGCGAGCCG CTGCCGCCGG CCCTGCGCCG GGTCCGCGCG
GCCCTCGCGG CAGGGGCAAG CCGCCGCACA CGCCTCATGG CAGCGGCCCT GCCCCCATCA
GTACTGCTGC GGTGGCGAAC CGCCGTGGCG GAAACCTCGG CCCGCCTGGT GGCGTCCTAC
GGCCGCCTCC AGTCCGTGGC CCTGCGCTGG AGCCCGCGTC GGCTGCTCAC CAACCGCCTT
CCCCGTTGA
|
|---|
| Protein sequence | MIAKRNLGLV AAAATLLAAA PLSAIFDRWT WLVQSAITVA VVAAVAALAR LGRIPLWGQV
LAMLGGLVLA LTWLFPSGAE LLGVVPTPST VGHFGSLAEA SLVDMRSYGV KVPDTDPMLF
LAVLGVGGVA VLVDLVAVEL RKPALAGLPM LAIYSVPVAV YVDSVPPAPF IIGAAGYLWL
LVADNVDCVR RFGRRFTGDG RGVDVWAASP LSSAGRRLAA VGVVVAVVLP LAAPGMAGGL
LDTIGSGTGE GTGGSGRATN GRVDLFSALT GQLNQNEVTD MVKVTTDESS PFYLRFGVAD
QLRTDGFRAR APSGSSASRE LRPAEPDREG IERTRYRATV EVMESFEMPL LPVYAEPVRI
QGLNGKWFYD TNQQVLFSNR ERSSGKRYEF EYVRSTYSPS ALRQARPLPA EHSLRRQMST
PTVPAVEALV DELTQGRDTE YDKVRAIYDH FATENGFSYA LSTEGGTSGQ EIVDFLTNKV
GFCQQYAAAM AWLVRAADIP ARVAFGFTNG ANVDGDTYVL TNRNLHAWTE VYFDGFGWVP
FDTTPAYGVQ GAARTAWAPD LEAAEDVTPE PNTTAGPAGS DPTTNPNQLE EGLEDELSGL
PGDTGTPNRP LPLWVWWAAG ALILLVLLAV PALRRSLLRR RRSGRRAPAA APAGTATANA
VAASPDGRHM VVLADADRAR ADAHAAWDEL LDTLVDFRLR IDRTETPRAT VGRLTREAFR
EDTEAASAVQ LLGRAEELAR YARDPHSGEP LPPALRRVRA ALAAGASRRT RLMAAALPPS
VLLRWRTAVA ETSARLVASY GRLQSVALRW SPRRLLTNRL PR
|
|---|
| |