| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3418 |
|---|
| Symbol | hisH |
|---|
| ID | 5704027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 3945959 |
|---|
| End bp | 3946591 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641272845 |
|---|
| Product | imidazole glycerol phosphate synthase subunit HisH |
|---|
| Protein accession | YP_001538211 |
|---|
| Protein GI | 159038958 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0118] Glutamine amidotransferase |
|---|
| TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0160155 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAGGG TCGTGGTGCT GGACCACGGG TCGGGCAACC TCCGTTCCGC GGAGCGCGCC
CTCGCCGCGG CCGGCGCGGA CGTGACGGTG ACCGACGATC TGGCTGCCGC CGCCGACGCG
GACGGTCTGG TGGTCCCGGG TGTCGGGGCC TTCGCCGCGT GTATGGCGGG GATCGAGGCG
TTGGGTGCCG GCTCGGTGAT CGTCAGGCGG GTCGAGGCCG GCCGTCCGGT GCTCGGCATC
TGTGTCGGTA TGCAGGTGCT CTTCGAGCAC GGAGACGAGC ACGGGGTGGT GACCAAGGGG
CTTGGGCTGC TGCCGGGCGG GGTGAGTCGC CTGTCCGCTG CGCGGCTGCC GCACATGGGC
TGGAACACGG TGCGTCCGCC GGTTGACTCG GTGCTCTTCG CTGGCCTGCC GGCCGAAAGC
CGGTTCTATT TCATCCACTC GTACGCCGCA GGTGGGGTGG CCGAGTTGAC CGCTGCCGGT
GCTGCCGTCA CCGCAGCGCA CCACGGGACG GAGTTCGTGG CGGCCGTGGA ACGGGGTCCA
CTCGCCGCGG TTCAGTTCCA TCCGGAAAAG TCCGCCGAGC CCGGTGCTGT GCTGCTGCGC
AACTGGCTGG CCACGCTTCC CGCCGATGGG TGA
|
|---|
| Protein sequence | MSRVVVLDHG SGNLRSAERA LAAAGADVTV TDDLAAAADA DGLVVPGVGA FAACMAGIEA
LGAGSVIVRR VEAGRPVLGI CVGMQVLFEH GDEHGVVTKG LGLLPGGVSR LSAARLPHMG
WNTVRPPVDS VLFAGLPAES RFYFIHSYAA GGVAELTAAG AAVTAAHHGT EFVAAVERGP
LAAVQFHPEK SAEPGAVLLR NWLATLPADG
|
|---|
| |