Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3411 |
Symbol | |
ID | 5704020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3941019 |
End bp | 3941675 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641272838 |
Product | hypothetical protein |
Protein accession | YP_001538204 |
Protein GI | 159038951 |
COG category | [S] Function unknown |
COG ID | [COG2364] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00640834 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGACCCAGA TTGGCAATCT CAGCTACCGA CCCGCGCGAC GGCTGACCCA GCTCTACGCT GGGCTCACCC TCTACGGCGT GAGCATGGCC CTGTTGATCC GCTCCGGCCT CGGCCTGGAC CCCTGGGACG TCTTCCACCA AGGGCTCGCC GGACACACCG GGCTCTCCTT CGGCACGGTG ACCATCGCGG TCGGGACGCT GGTGCTGCTG CTGTGGATCC CGCTGCGGCA GCGGCCGGGC CTCGGCACGG TCAGCAATGT GGTGGTGGTC GGGCTCGTGG TGGACGCCAC CCTCGCCCTG CTACCGGCGG ACCTGCCGCT CGCCACCCGA ACCGCCCTAC TCGTCGGTGG GATCGTCGCC AACGGCACGG CGACCGGACT CTATCTCGGC GCCCGGCTCG GCCCCGGCCC CCGCGACGGC CTGATGACCG GCTTCGTCGC CCGCCGGCCA CGATTCTCGA TCCGGCTCGT CCGCACCACC ATCGAAGTCG CCGTACTGGG GCTGGGCTGG CTACTCGGCG GCACGGTCGG CCCCGGCACG GTGGCGTATG CCCTGTCCAT CGGCCCGCTG ACCCAGTTCG TGCTGCCCCG CGTGACGGTC CCTCTTCCGC CCAACCCCAC CCCGCCCACC TCCACCCCGC TCCCGGCTCC CGGTTGA
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Protein sequence | MTQIGNLSYR PARRLTQLYA GLTLYGVSMA LLIRSGLGLD PWDVFHQGLA GHTGLSFGTV TIAVGTLVLL LWIPLRQRPG LGTVSNVVVV GLVVDATLAL LPADLPLATR TALLVGGIVA NGTATGLYLG ARLGPGPRDG LMTGFVARRP RFSIRLVRTT IEVAVLGLGW LLGGTVGPGT VAYALSIGPL TQFVLPRVTV PLPPNPTPPT STPLPAPG
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