| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3410 |
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| Symbol | |
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| ID | 5704019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 3939500 |
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| End bp | 3940957 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641272837 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001538203 |
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| Protein GI | 159038950 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.723571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0095682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGAGTC AGATACGCGG AAACCAATTG GCCCGGCTAC TCGGCCAGTG GCATGCGCTT
CCCGGTCGTC GGCGCAGCCC CGACTATGCG GCGCTGGCCG CGGCCATCCG GGGGCTGCTC
GCCGACGGGC GGCTTCCGCT GGGCGCCCGC CTGCCGGCCG AGCGCGAGCT GGCCGAGGCC
CTGCGGATCA GCCGCACCAC GGTCACCGCG GCGTACCGGG AACTGCGGGA CAGCGGTCAC
CTCGCCAGCC GGCGGGGCGC GGGCAGCTGG ACCATGCTTC CCGGCAACCA CCGGATGGCG
GGTAACGGCC TGTGGACTCC GCTGGACGAT CGCGACATGC TTGATCTTGG GGTCGCCGCC
CTGGCCGCCC CGCCCGAGCT GTTGCCCGCC GCCCAGGCCG CCGCCGAGGA CCTGCCCCGC
TACCTGGGTG GGGCGGGATA TCACCCGACC GGCATCAGCG AACTGCGGGA GGCGGTCGCC
CGCACGTACA GCAACCGGGG ACTACCCACC TCACCCGAAC AGATCATGGT CACCAACGGC
ACCCAGCATG CTCTGGACCT GGTGCTGCGC CTGACGCACA ACCCTGGTGG CAGCGTCCTG
GTGGAGGCCC CCAGCTATCC GAACGCGCTG GCCGCGCTGC ACGCCCGTCG CGCCCGGATC
GCCACCCACG GCCTCGCCCC GGACGAACCC GGGTGGGACG CGGACCTGTT GCTCGGCACC
CTACGCCAGG GGCGACCCAA ACTGGCCTAC CTGATCCCCG ACTTCCAGAA CCCGACCGGC
CACCTGATGT CGGCGGAACT GCGGGAACGG CTGGTCGCCA CCGCCCACGC CGTCGGCGCC
GACCTGGTGA TCGATGAGTC CTTCGTGGAT CTGTCCCTGG ACGGTACGGT GATGCCCCCG
CCGACGGCCA GTTTCGATCG GCACTCCCGC GTGGTCACCG TCGGGGGGAT GAGCAAGGCG
TACTGGGGCG GGCTGCGGAT CGGCTGGATC CGCGCGTCCG CGCCGCAGGT GCAGCGGCTG
GCCGCCGCCC GGGTCGGCGT GGACATGGCG AGTCCGGTGC TGGACCAACT GGTCGCCGTT
CACCTGCTGG CGCAGAGTCC GACGATCGTC GCGGCCCGGC GGGCGCAGCT CACTGCGCAG
CGTGACGTGC TGCTCGGCGC CCTCGCCGAC CGCCTGCCCG AATGGCGGGT GACTGTGCCA
CACGGTGGGG TGACTCTCTG GGCCGAACTC GATGGTCCGA TCTCCAGCGC GCTCGCCCGG
GCCGCCGAGC AGGCCGGCGT ACGTCTTGCC CCCGGCCCCC GTTTCGGCCT CGACGGAACG
TTGGAGCGGT TCCTGCGGTT GCCGTTCACC CTGCCCGTGG CCGACCTGGT GGAGGCGGTC
GACCGGATCG CCGCCATCCG CTACGACCTT GACCGCGTTG GCCGGCCGGG CTGGTCGGAG
CCCGCTGTCA TCGCCTGA
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| Protein sequence | MTSQIRGNQL ARLLGQWHAL PGRRRSPDYA ALAAAIRGLL ADGRLPLGAR LPAERELAEA
LRISRTTVTA AYRELRDSGH LASRRGAGSW TMLPGNHRMA GNGLWTPLDD RDMLDLGVAA
LAAPPELLPA AQAAAEDLPR YLGGAGYHPT GISELREAVA RTYSNRGLPT SPEQIMVTNG
TQHALDLVLR LTHNPGGSVL VEAPSYPNAL AALHARRARI ATHGLAPDEP GWDADLLLGT
LRQGRPKLAY LIPDFQNPTG HLMSAELRER LVATAHAVGA DLVIDESFVD LSLDGTVMPP
PTASFDRHSR VVTVGGMSKA YWGGLRIGWI RASAPQVQRL AAARVGVDMA SPVLDQLVAV
HLLAQSPTIV AARRAQLTAQ RDVLLGALAD RLPEWRVTVP HGGVTLWAEL DGPISSALAR
AAEQAGVRLA PGPRFGLDGT LERFLRLPFT LPVADLVEAV DRIAAIRYDL DRVGRPGWSE
PAVIA
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