Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3390 |
Symbol | |
ID | 5707834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3914078 |
End bp | 3914875 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641272817 |
Product | hypothetical protein |
Protein accession | YP_001538183 |
Protein GI | 159038930 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.402053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0777437 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACCCC GCCCGCTCGC CCGTGCCCTG GCGTCGCTAG TCGCCCTCTG TGTCGCCGTG GTCGGCGCGG TGCTGGTCCC CAGCACCGCG CAGGCGGCGA CCATCAACTA CGTCGCGCTC GGCGACTCGT ACTCCTCCGG CGTCGGTGCC GGGCCGTATG ACGGGTCATC CTGCCTGCGC AGCCAGAAGT CGTACGCCCC GATGTGGGCC GAGGCCAACG CGGTGGCCAG CTTCCAGTTC CCGGCCTGCG GCGGCGCGGT CACCGCCGAC GTCATCAACA GCCAGGTCAA CGCGCTCAGC ACCAGCACCA CAATGGTGAC CATCACGATC GGCGGTAACG ACGCCGGTTT CGCCAGCGTG ATGCTCACCT GTAGGTTCGG CCGCACCTCG GACTGCGACG ACGCCGTCGA GACGGCCAGG AGCTTCGCCC AGACCACGCT GCCCGGCCGA CTGGACGCCA CGTACGCTGC CATCCGTGAC CGGGCCCCGA ACGCCCGGCT CATCGTGCTC GGCTACCCGC GCCTGTTCGA GACCGGCTGG TGTAGCCTGT TTGGAATGAG CACCGCCAAG CGGCAGAAGC TCAACGATGC CGCGGACCTG CTCGTCACCA TCACTGCCGG CCGCGCCGCG GCGGCCGGGG CCACCTTCGC CGACACCCGT TCCCAGTTCG CCGGGCACGG TGTCTGCGGC GGCGATCCCT GGATCAACGA TGTCACCGGG ATCATCGAGG CGTACCACCC GAATGATGAG GGCTATCGAT ACGGCTACCT GGCGGCGCTC AACGACGTCA TCAGCTGA
|
Protein sequence | MPPRPLARAL ASLVALCVAV VGAVLVPSTA QAATINYVAL GDSYSSGVGA GPYDGSSCLR SQKSYAPMWA EANAVASFQF PACGGAVTAD VINSQVNALS TSTTMVTITI GGNDAGFASV MLTCRFGRTS DCDDAVETAR SFAQTTLPGR LDATYAAIRD RAPNARLIVL GYPRLFETGW CSLFGMSTAK RQKLNDAADL LVTITAGRAA AAGATFADTR SQFAGHGVCG GDPWINDVTG IIEAYHPNDE GYRYGYLAAL NDVIS
|
| |