| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3387 |
|---|
| Symbol | |
|---|
| ID | 5707831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 3911786 |
|---|
| End bp | 3912760 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641272814 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001538180 |
|---|
| Protein GI | 159038927 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.962121 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0912472 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACTG TCGAACTACC GGAGGCTGTT GGCGCCCCCA GCGATCCCGA CGACTACCTG
GTCCTCGACG TTCGCGACCT GCGCATGCGC TACGGCACCG TGGACGTGCT GAGCGGCGTA
AACCTCACCG CCCAACGGGG CGAGGTGATC GCGCTGCTCG GGCCCAACGG TGCCGGGAAG
ACCACCACTA TCGAGATCCT CGAGGGATTC CGGCTGCGCT CGGCCGGCAC GGTTCGGGTA
CTCGGCGTCG ACCCGGCCCG CGGCGACGAG CGGTGGCGCG CCCGAGTCGG CGTCGTGCTC
CAATCCTGGC GCGACCACGG CAGGTGGCGG GTGCGGGACC TGCTCTCCCA CCTCGGCAGC
TTCTACGCGC CGTACTCGGT CGACCAGATC CCGCGCCCGT GGCCCGTGGA CGACCTGCTG
GCGGCCGTGG GCCTGACCGC GCAGGCCAAT GCCCGGGTGT CCCGGCTCTC CGGGGGGCAG
CGTCGACGGC TCGATGTGGC GATCGGCATC GTGGGCCGGC CGGAGCTGCT CTTCCTGGAC
GAGCCGACGG TCGGCCTCGA TCCGGCTGCC CGACGCGAGT TCCACGAGTT GGTGCACCGT
CTCGCCGACC TGGACGAGAC CACCATCGTG CTGACCACCC ACGACCTGGC CGAGGCGGAG
AAGCTGGCGG ATTCGATCCT CATCCTGGCC AACGGCCGGA TCATCGCCCA GGGCTCACCG
GACCAGTTGT CCCGCCGCAT GGCCGGGGAG GCGGAGGTCC GCTGGACCCA CGACGGTGAA
CGCCACGTGC ACGCCACCGT CGACGCCACC GGATTCCTGC GCGACCTGCT CCGCGAACAC
GGCGACCAGG TGCAGGAACT GGAGGTACGC CGCGCCACCC TGGAGGACGC GTACCTGGCC
CTGGTGCACG AAGAAGAAAC CGGAATCCGT AGCGGCAGGG CCGAGCGGGT GTGGCAGCAG
GAGGAGAACC GATGA
|
|---|
| Protein sequence | MTTVELPEAV GAPSDPDDYL VLDVRDLRMR YGTVDVLSGV NLTAQRGEVI ALLGPNGAGK
TTTIEILEGF RLRSAGTVRV LGVDPARGDE RWRARVGVVL QSWRDHGRWR VRDLLSHLGS
FYAPYSVDQI PRPWPVDDLL AAVGLTAQAN ARVSRLSGGQ RRRLDVAIGI VGRPELLFLD
EPTVGLDPAA RREFHELVHR LADLDETTIV LTTHDLAEAE KLADSILILA NGRIIAQGSP
DQLSRRMAGE AEVRWTHDGE RHVHATVDAT GFLRDLLREH GDQVQELEVR RATLEDAYLA
LVHEEETGIR SGRAERVWQQ EENR
|
|---|
| |