Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3375 |
Symbol | |
ID | 5703409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3898757 |
End bp | 3899929 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641272801 |
Product | inner-membrane translocator |
Protein accession | YP_001538168 |
Protein GI | 159038915 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0104917 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAGG CACTACGACA CTTCAACGAG CGGCGCCGGC ACGTGTTGGG GGGCATGGCC GACCGGTGGC GTGCGCTGCC CCGTTGGCAG CGTTGGCTGA CGGTACTTGC GGGGATCGCG TTCCTCTACT ACCTACCGTT CCTCGGCGAC ATCCCGGGGA CCAACCTGAT CATCCCGGGG ATCGACTGGT TCCGGACCGA CTCCATCGAT GGTGGATCGA ACTGGGCCGG GGTGCTCTTC GTCTGCGCCC TGTATGTCCT GGTGGCCATC GGACTCAATG TCGTGATCGG GCTGGCCGGT CTGCTCGACC TTGGCTATGT CGGCTTCTAC GCCGTGGGCG CATACAGTGT GGCGCTTTTC GGCTCGGCCC AGTCGCCGGT GGTGCAGGCG TTGCAGCGGC AGTTCGGTCT GTCCCAGGAC TGGGCGATCG CCTGGGCGAT CTGCATCCCG ATCGCGTTGG CCTTCTCCCT GGTCGCGGGC GTGCTGCTCG GTTGGCCCAC GCTGCGGCTG CGCGGCGACT ACCTGGCTAT CGTGACGCTG GGTTTCGGCG AGATCATCCG TATCGTCGCG AAGAACTCGG CGTGGGCGGG CGAGGCGCAG GGCGTGCCCG GCATCCCCGG CCCGGAAGGC CCACCGTCGG CCGACAACAC GGTGTTCGGG TTGCTCGACA TCAAGCCCTG GTACTGGCTT GCCGTAACCG TGGTGTTGTT GATGGTCATG CTGGTCCGGC GGCTGGAGCA CAGCCGGGTC GGGCGGTCGT GGCTGGCCAT TCGGGAGGAC GAGGACGCCG CCGCGGTGAT GGGTGTCTAC CCGTTCAAGT TCAAGCTGTG GGCGTTCGCG ATCGGCGCGG CTCTGGGTGG GTTCTCCGGT CTGCTCTTCG CGAGCCGGTC GGCCTTCATC CAGCCGGAGA CCTTCAACGT TCAGCTCTCC ATCCTGTTCG TCGCGATGGT GGTGGTCGGC GGTTCCGGCA ACATGGCGGG CGTCGCGCTC GGCGCGTTCC TGCTCGCGTA TCTGCCGGAG CGGTTCCGAG ACTTCGCGGA GTACCGGGTC CTCGCCTTCG GTCTAGCCTT GGTGCTCATC ATGCTGCTGC GCCCGCAGGG TCTGCTGCCG AGTAGGCGGC GAACGCGCGA GCTACAGGAC AGGGCGAAGG AGGCTCCGGT AAATGTTGCC TAG
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Protein sequence | MTEALRHFNE RRRHVLGGMA DRWRALPRWQ RWLTVLAGIA FLYYLPFLGD IPGTNLIIPG IDWFRTDSID GGSNWAGVLF VCALYVLVAI GLNVVIGLAG LLDLGYVGFY AVGAYSVALF GSAQSPVVQA LQRQFGLSQD WAIAWAICIP IALAFSLVAG VLLGWPTLRL RGDYLAIVTL GFGEIIRIVA KNSAWAGEAQ GVPGIPGPEG PPSADNTVFG LLDIKPWYWL AVTVVLLMVM LVRRLEHSRV GRSWLAIRED EDAAAVMGVY PFKFKLWAFA IGAALGGFSG LLFASRSAFI QPETFNVQLS ILFVAMVVVG GSGNMAGVAL GAFLLAYLPE RFRDFAEYRV LAFGLALVLI MLLRPQGLLP SRRRTRELQD RAKEAPVNVA
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