Gene Sare_3375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3375 
Symbol 
ID5703409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3898757 
End bp3899929 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content66% 
IMG OID641272801 
Productinner-membrane translocator 
Protein accessionYP_001538168 
Protein GI159038915 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0104917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGG CACTACGACA CTTCAACGAG CGGCGCCGGC ACGTGTTGGG GGGCATGGCC 
GACCGGTGGC GTGCGCTGCC CCGTTGGCAG CGTTGGCTGA CGGTACTTGC GGGGATCGCG
TTCCTCTACT ACCTACCGTT CCTCGGCGAC ATCCCGGGGA CCAACCTGAT CATCCCGGGG
ATCGACTGGT TCCGGACCGA CTCCATCGAT GGTGGATCGA ACTGGGCCGG GGTGCTCTTC
GTCTGCGCCC TGTATGTCCT GGTGGCCATC GGACTCAATG TCGTGATCGG GCTGGCCGGT
CTGCTCGACC TTGGCTATGT CGGCTTCTAC GCCGTGGGCG CATACAGTGT GGCGCTTTTC
GGCTCGGCCC AGTCGCCGGT GGTGCAGGCG TTGCAGCGGC AGTTCGGTCT GTCCCAGGAC
TGGGCGATCG CCTGGGCGAT CTGCATCCCG ATCGCGTTGG CCTTCTCCCT GGTCGCGGGC
GTGCTGCTCG GTTGGCCCAC GCTGCGGCTG CGCGGCGACT ACCTGGCTAT CGTGACGCTG
GGTTTCGGCG AGATCATCCG TATCGTCGCG AAGAACTCGG CGTGGGCGGG CGAGGCGCAG
GGCGTGCCCG GCATCCCCGG CCCGGAAGGC CCACCGTCGG CCGACAACAC GGTGTTCGGG
TTGCTCGACA TCAAGCCCTG GTACTGGCTT GCCGTAACCG TGGTGTTGTT GATGGTCATG
CTGGTCCGGC GGCTGGAGCA CAGCCGGGTC GGGCGGTCGT GGCTGGCCAT TCGGGAGGAC
GAGGACGCCG CCGCGGTGAT GGGTGTCTAC CCGTTCAAGT TCAAGCTGTG GGCGTTCGCG
ATCGGCGCGG CTCTGGGTGG GTTCTCCGGT CTGCTCTTCG CGAGCCGGTC GGCCTTCATC
CAGCCGGAGA CCTTCAACGT TCAGCTCTCC ATCCTGTTCG TCGCGATGGT GGTGGTCGGC
GGTTCCGGCA ACATGGCGGG CGTCGCGCTC GGCGCGTTCC TGCTCGCGTA TCTGCCGGAG
CGGTTCCGAG ACTTCGCGGA GTACCGGGTC CTCGCCTTCG GTCTAGCCTT GGTGCTCATC
ATGCTGCTGC GCCCGCAGGG TCTGCTGCCG AGTAGGCGGC GAACGCGCGA GCTACAGGAC
AGGGCGAAGG AGGCTCCGGT AAATGTTGCC TAG
 
Protein sequence
MTEALRHFNE RRRHVLGGMA DRWRALPRWQ RWLTVLAGIA FLYYLPFLGD IPGTNLIIPG 
IDWFRTDSID GGSNWAGVLF VCALYVLVAI GLNVVIGLAG LLDLGYVGFY AVGAYSVALF
GSAQSPVVQA LQRQFGLSQD WAIAWAICIP IALAFSLVAG VLLGWPTLRL RGDYLAIVTL
GFGEIIRIVA KNSAWAGEAQ GVPGIPGPEG PPSADNTVFG LLDIKPWYWL AVTVVLLMVM
LVRRLEHSRV GRSWLAIRED EDAAAVMGVY PFKFKLWAFA IGAALGGFSG LLFASRSAFI
QPETFNVQLS ILFVAMVVVG GSGNMAGVAL GAFLLAYLPE RFRDFAEYRV LAFGLALVLI
MLLRPQGLLP SRRRTRELQD RAKEAPVNVA