Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3373 |
Symbol | |
ID | 5703407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3897144 |
End bp | 3897854 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641272799 |
Product | ABC transporter related |
Protein accession | YP_001538166 |
Protein GI | 159038913 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.710585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0235657 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGCTTG AGATTGACAA TCTGACCCTC CGGTACGGCC GGATCGAGGC GCTGCACGGG ATCAGCCTGC ATGTGAACGA AGGTGAGGTG GTCGCGCTCA TCGGCGCGAA CGGCGCCGGG AAGACCACCA CCATGCGGGC GATCTCCGGA CTCCGGCCGG TGAGCGAGGG GGCGATCCGG TTCAACGGTG AGGACATCAC CAACCTCCGG GCTGACCTGC GGGTACGGCG GGGTATCTGC CAGGCGCCCG AGGGACGCGG CATCTTCCCG GGCATGACGG TGTTGGACAA CCTCGACATG GGGGCGTACA CCCGCCGAGA CCACGCTGGG ATCGCCGCTG ACCTGGACCG GGTGTTCGAG TTGTTCCCTC GGCTGGCTGA GCGGCGTCGC CAGCAGGGGG GCACGCTCTC CGGCGGCGAA CAGCAGATGC TCGCGGTCGG TCGGGCGTTG ATGGCTCGGC CGAAGCTGCT GCTGCTGGAC GAGCCGTCGA TGGGGCTGGC CCCGATGATC ATTCAGCAGA TCTTCGACAT CATCCTGGAG ATCAACCAGC AGGGCACCAC GATCCTGCTG GTGGAGCAGA ATGCCCAGCA GGCGCTTTCC CGGGCGCACC GTGGGTACGT GTTGGAGACG GGCCAGATCG TCAAGGAGGG CACTGGCCAG GACCTGCTGC ACGACCCGTC GGTGAAGGAG GCGTATCTCG GCGTGGCCTG A
|
Protein sequence | MLLEIDNLTL RYGRIEALHG ISLHVNEGEV VALIGANGAG KTTTMRAISG LRPVSEGAIR FNGEDITNLR ADLRVRRGIC QAPEGRGIFP GMTVLDNLDM GAYTRRDHAG IAADLDRVFE LFPRLAERRR QQGGTLSGGE QQMLAVGRAL MARPKLLLLD EPSMGLAPMI IQQIFDIILE INQQGTTILL VEQNAQQALS RAHRGYVLET GQIVKEGTGQ DLLHDPSVKE AYLGVA
|
| |