Gene Sare_3373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3373 
Symbol 
ID5703407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3897144 
End bp3897854 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content67% 
IMG OID641272799 
ProductABC transporter related 
Protein accessionYP_001538166 
Protein GI159038913 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.710585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0235657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTTG AGATTGACAA TCTGACCCTC CGGTACGGCC GGATCGAGGC GCTGCACGGG 
ATCAGCCTGC ATGTGAACGA AGGTGAGGTG GTCGCGCTCA TCGGCGCGAA CGGCGCCGGG
AAGACCACCA CCATGCGGGC GATCTCCGGA CTCCGGCCGG TGAGCGAGGG GGCGATCCGG
TTCAACGGTG AGGACATCAC CAACCTCCGG GCTGACCTGC GGGTACGGCG GGGTATCTGC
CAGGCGCCCG AGGGACGCGG CATCTTCCCG GGCATGACGG TGTTGGACAA CCTCGACATG
GGGGCGTACA CCCGCCGAGA CCACGCTGGG ATCGCCGCTG ACCTGGACCG GGTGTTCGAG
TTGTTCCCTC GGCTGGCTGA GCGGCGTCGC CAGCAGGGGG GCACGCTCTC CGGCGGCGAA
CAGCAGATGC TCGCGGTCGG TCGGGCGTTG ATGGCTCGGC CGAAGCTGCT GCTGCTGGAC
GAGCCGTCGA TGGGGCTGGC CCCGATGATC ATTCAGCAGA TCTTCGACAT CATCCTGGAG
ATCAACCAGC AGGGCACCAC GATCCTGCTG GTGGAGCAGA ATGCCCAGCA GGCGCTTTCC
CGGGCGCACC GTGGGTACGT GTTGGAGACG GGCCAGATCG TCAAGGAGGG CACTGGCCAG
GACCTGCTGC ACGACCCGTC GGTGAAGGAG GCGTATCTCG GCGTGGCCTG A
 
Protein sequence
MLLEIDNLTL RYGRIEALHG ISLHVNEGEV VALIGANGAG KTTTMRAISG LRPVSEGAIR 
FNGEDITNLR ADLRVRRGIC QAPEGRGIFP GMTVLDNLDM GAYTRRDHAG IAADLDRVFE
LFPRLAERRR QQGGTLSGGE QQMLAVGRAL MARPKLLLLD EPSMGLAPMI IQQIFDIILE
INQQGTTILL VEQNAQQALS RAHRGYVLET GQIVKEGTGQ DLLHDPSVKE AYLGVA