Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3353 |
Symbol | |
ID | 5705859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3871913 |
End bp | 3872116 |
Gene Length | 204 bp |
Protein Length | 67 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641272779 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_001538146 |
Protein GI | 159038893 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0827794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00618792 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAACCG GCACCGTCAA GTGGTTCAAC GCAGAAAAGG GCTTCGGCTT CATCGAGCAG GACGGCGGGG GGCCGGACGT TTTCGTCCAC TACTCGTCGA TCTCGATGAG CGGTTACCGG GAGCTGAGCG AGGGCCAGAA GGTCGATTTC GATGTGACCC AGGGCCAGAA GGGCCCGCAG GCGGACAACG TCCGCCCGAT GTGA
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Protein sequence | MATGTVKWFN AEKGFGFIEQ DGGGPDVFVH YSSISMSGYR ELSEGQKVDF DVTQGQKGPQ ADNVRPM
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