Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3345 |
Symbol | |
ID | 5708300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3863392 |
End bp | 3864120 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641272772 |
Product | deoxyribonuclease V |
Protein accession | YP_001538139 |
Protein GI | 159038886 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000497399 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000156681 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCCGACGT CAGGCGACAG TACGTCCCCA GGTCCAGATA TATCCCAAGC CTTACGCCAG CAAATAGAGC TGCGTAGCCA GGTCGACATC ACTAATAGCT TGGCTACCAC TCCAGAATTG GTGGCCGGCT TGGACGTATC TTACGAAGTT GGCACGCGAC GAGTCGCAGC CGCAGCCATC GTGATGGAAT CACGAACCTT CGAGGTAAGG GAAGCTTCCG ACGCATTTGG AGAAGTGAAT TTTCCGTACG TTCCGGGACT GCTGGCTTTT CGCGAAGTCC CAATTCTTCT GGAGGCGCTC GAGAAACTTT CATGCCGACC CGAGGTCCTC GTCTGCGACG GCTACGGTAT TGCTCACCCA AGAAGATTTG GGCTGGCCTG CCACATAGGC GTATTGACTG GACTGCCGTC ATTTGGCGTG GCGAAGTCAC CTTTTATCGG GACATTCGCA GAGCCGGGAG CGAAACGAGG TGAATGGTCG CCACTCAGCG ATGACGGCGA GATAGTCGGG CGCGCGCTTC GTACGCAGGC ATGCATTAGG CCAGTATTCG TATCTGTTGG CCATCGAATT GACTTGGATC AGGCTACCGA CTTGACGCTG ACGCTGAGCC GTCGATATCG GATCCCCGAA GCGATCCGCA AGGCGGACTT TCACTCACGC GAAGCACTGC GGAAGTTTCC ACAAAAGATC AAAGGGGATG ACGCCAAAGA GGACCTCACT GCGACGTAA
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Protein sequence | MPTSGDSTSP GPDISQALRQ QIELRSQVDI TNSLATTPEL VAGLDVSYEV GTRRVAAAAI VMESRTFEVR EASDAFGEVN FPYVPGLLAF REVPILLEAL EKLSCRPEVL VCDGYGIAHP RRFGLACHIG VLTGLPSFGV AKSPFIGTFA EPGAKRGEWS PLSDDGEIVG RALRTQACIR PVFVSVGHRI DLDQATDLTL TLSRRYRIPE AIRKADFHSR EALRKFPQKI KGDDAKEDLT AT
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