Gene Sare_3345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3345 
Symbol 
ID5708300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3863392 
End bp3864120 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content56% 
IMG OID641272772 
Productdeoxyribonuclease V 
Protein accessionYP_001538139 
Protein GI159038886 
COG category[L] Replication, recombination and repair 
COG ID[COG1515] Deoxyinosine 3'endonuclease (endonuclease V) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000497399 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000156681 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCCGACGT CAGGCGACAG TACGTCCCCA GGTCCAGATA TATCCCAAGC CTTACGCCAG 
CAAATAGAGC TGCGTAGCCA GGTCGACATC ACTAATAGCT TGGCTACCAC TCCAGAATTG
GTGGCCGGCT TGGACGTATC TTACGAAGTT GGCACGCGAC GAGTCGCAGC CGCAGCCATC
GTGATGGAAT CACGAACCTT CGAGGTAAGG GAAGCTTCCG ACGCATTTGG AGAAGTGAAT
TTTCCGTACG TTCCGGGACT GCTGGCTTTT CGCGAAGTCC CAATTCTTCT GGAGGCGCTC
GAGAAACTTT CATGCCGACC CGAGGTCCTC GTCTGCGACG GCTACGGTAT TGCTCACCCA
AGAAGATTTG GGCTGGCCTG CCACATAGGC GTATTGACTG GACTGCCGTC ATTTGGCGTG
GCGAAGTCAC CTTTTATCGG GACATTCGCA GAGCCGGGAG CGAAACGAGG TGAATGGTCG
CCACTCAGCG ATGACGGCGA GATAGTCGGG CGCGCGCTTC GTACGCAGGC ATGCATTAGG
CCAGTATTCG TATCTGTTGG CCATCGAATT GACTTGGATC AGGCTACCGA CTTGACGCTG
ACGCTGAGCC GTCGATATCG GATCCCCGAA GCGATCCGCA AGGCGGACTT TCACTCACGC
GAAGCACTGC GGAAGTTTCC ACAAAAGATC AAAGGGGATG ACGCCAAAGA GGACCTCACT
GCGACGTAA
 
Protein sequence
MPTSGDSTSP GPDISQALRQ QIELRSQVDI TNSLATTPEL VAGLDVSYEV GTRRVAAAAI 
VMESRTFEVR EASDAFGEVN FPYVPGLLAF REVPILLEAL EKLSCRPEVL VCDGYGIAHP
RRFGLACHIG VLTGLPSFGV AKSPFIGTFA EPGAKRGEWS PLSDDGEIVG RALRTQACIR
PVFVSVGHRI DLDQATDLTL TLSRRYRIPE AIRKADFHSR EALRKFPQKI KGDDAKEDLT
AT