| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3336 |
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| Symbol | |
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| ID | 5708291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 3847618 |
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| End bp | 3849468 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641272763 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001538130 |
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| Protein GI | 159038877 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00306919 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCTCCC CCACCGACCA GCGCCCCGCC GCGCTGGAGA CGCTGCGGCG TGTCTTCGGC
TACGACGCCT TCCGGGGCTT CCAGCAGGAG GTCATCGCAC ACCTGACGGC CGGCGGGGAC
GCCTTGGTGT TGATGCCCAC CGGTGGCGGC AAGTCGCTGT GCTACCAGAT CCCGGCACTG
CTGCGGGACG GAGTCGCGGT GGTCGTGTCG CCGTTGATCG CACTGATGCA GGACCAGGTC
GACGCGCTGA CCGCGGTCGG GGTTCGGGCC GGCTTCCTCA ACTCGACGCT GGACCTCGAC
GCCCGTCGCG CCGTCGAGCG GGCCTTCGTC GCCGGTGACC TGGACCTGCT CTACCTCGCC
CCGGAAGCCC TGGGCACCCG GGGCGTGCAG CACCTGCTCG ACCAAGGGAA CATCAGCCTG
TTCGCGATCG ACGAGGCACA CTGTGTGTCG CAGTGGGGGC ACGACTTCCG CCCGGACTAC
CTCACCCTGT CGGTGCTGCA CGAGCGTTGG CCCGGGGTGC CCCGCATCGC GTTGACCGCC
ACCGCGACCA GCGCCACTCG GGCCGAGATC TCGACCCGGC TGCAGCTCAC CTCGGCCCGG
CACTTTGTCG CCAGCTTCGA CCGCCCCAAC ATCCAGTACC GCATCGTCCC GAAGCGGGAG
CCGAAGCGGC AGCTGCTGGC CCTGCTGCGG GACGAGCACC CGGGGGATGC CGGAATCGTC
TACTGCCTGT CCCGGGCCAC CGTGGAAAAG ACAGCGGAGT TCCTGGTCGA CAACGGTATT
GCCGCACTGC CGTACCACGC CGGCCTGGAC GCGGCCACCC GAGCTCGACA CCAGCAGCGC
TTCCTGCGGG AGGACGGCCT GGTCATGGTC GCGACGATCG CGTTCGGGAT GGGCATCGAC
AAGCCTGACG TGCGGTTCGT CGCCCACCTC GACCTGCCGA AGTCGGTGGA GGGCTACTAC
CAGGAGACCG GCCGCGCCGG GCGGGACGGC CTGCCGTCGA CGGCCTGGCT CGCCTACGGT
CTGACGGATG TGGTGCAGCA ACGCCGGCTG ATCGACACCT CGGAGGGGGA TCTGGCGCAC
CGGCGTAACC TCGCCGCCCA CCTGGAGGCG ATGCTCGCGC TCTGCGAAAC GGTCCGCTGT
CGCCGGGTGC AGCTGCTGGA CTACTTCGGC GAGACCGCCA CCGCCTGCGG CAACTGCGAC
ACGTGCCTGC AGCCACCCGA GTCGTGGGAC GGCACGATCG CCGCGCAGAA GCTGCTGTCC
ACGGTGTACC GGCTCGACCG GGAGCGACAC CAGCGGTTCG GCACCGGGCA CTGTGTCGAT
ATCCTGCTCG GCCGCGCCAC CGACAAGGTC CAGCAGCACC GGCACGACTC CCTGACAGTG
TTCGGGATCG GCACCGAGCT GAGCGAGGCG GAGTGGCGGG GTGTGGTCCG GCAGCTGCTC
GCCGAAGGGC TGCTGGCGGT TGAGGGCGAC TACGGCACCC TGGCCCTCAC CGACACCAGC
GCGGAGGTGC TGGGCCGGCG CCGCACCGTC ATGCTGCGCC GCGAACCGGC CCGGACCGCC
CGGCCGGCGA AGCCACGCGG CGCGGCCACC ATGGTCGCCG AGCTGGCCCC GGCCGCCGCC
GAGGTCTTCG AGCGGCTACG CGCCTGGCGG GCCGCCACGG CCAGGGAACA GGGCGTGCCC
GCCTACGTGA TCTTCCACGA CGCCACGCTG CGGCAGATCG CCAGCGACGC ACCGTCAGCA
TTGGCTGACC TGGCCCGGGT CAGTGGTGTC GGCGAGGCGA AACTCGCGAA GTACGGCGAG
CAGGTGCTGG CCGTCCTCGC CGGCGGCGAT GCGGACCCAC ACACCGCCTG A
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| Protein sequence | MPSPTDQRPA ALETLRRVFG YDAFRGFQQE VIAHLTAGGD ALVLMPTGGG KSLCYQIPAL
LRDGVAVVVS PLIALMQDQV DALTAVGVRA GFLNSTLDLD ARRAVERAFV AGDLDLLYLA
PEALGTRGVQ HLLDQGNISL FAIDEAHCVS QWGHDFRPDY LTLSVLHERW PGVPRIALTA
TATSATRAEI STRLQLTSAR HFVASFDRPN IQYRIVPKRE PKRQLLALLR DEHPGDAGIV
YCLSRATVEK TAEFLVDNGI AALPYHAGLD AATRARHQQR FLREDGLVMV ATIAFGMGID
KPDVRFVAHL DLPKSVEGYY QETGRAGRDG LPSTAWLAYG LTDVVQQRRL IDTSEGDLAH
RRNLAAHLEA MLALCETVRC RRVQLLDYFG ETATACGNCD TCLQPPESWD GTIAAQKLLS
TVYRLDRERH QRFGTGHCVD ILLGRATDKV QQHRHDSLTV FGIGTELSEA EWRGVVRQLL
AEGLLAVEGD YGTLALTDTS AEVLGRRRTV MLRREPARTA RPAKPRGAAT MVAELAPAAA
EVFERLRAWR AATAREQGVP AYVIFHDATL RQIASDAPSA LADLARVSGV GEAKLAKYGE
QVLAVLAGGD ADPHTA
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