Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3318 |
Symbol | |
ID | 5707185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3829644 |
End bp | 3831323 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641272745 |
Product | phosphoglucose isomerase (PGI) |
Protein accession | YP_001538112 |
Protein GI | 159038859 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00200112 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCGAGC TTCTCGGGCA GCCCGTCGAG GCCGCTGCCG GACTCACCGT ACGCGGGGCG GACGCGGTCG ACCGGGCCGC ACCCGCCTCC ATCAGGGAGG CGGTGACGGC GGACGATGTG CCGGGCCGGC TCGTCGCGAA GGACCCCACG CTCTGGGGCC CGGAGGCCGA GGCCGAGGCG CGGATCCGGC TGGGCTGGGT CGACACCCAC ACCCGGAGCC GGGAGTTGCT TCCTCAGCTC GCCGAGCTGA CCTCGGAGCT GGGCGACCTG GATCACGTGG TGCTGTGTGG GATGGGCGGT TCGTCGCTGG CCCCGGAGGT GATCGCCCGG ACCCTCGGCC GGCCGCTGAC CATCCTGGAC ACCACCGACC CGGGTCAGGT CCGGGCGGCG CTGGCCGACC GGCTGGAGCG GACGGTCGTC GTGGTGGCCA GCAAGTCCGG TTCGACCGTG GAGACCGACA GTCAGCGCCG GGCGTACTGG CAGGCGTTCC TGGACGCGGG CATGTCCGAG GCGGAGGCGG GGCGACACTT CGTGATCGTC ACCGACCCGG GCTCGCCACT GGCGACGACC GCCGCCAAGA TGGGAGCGTT CACCGTGTTG GCCGACCCGA ACGTCGGCGG GCGGTTCTCC GCGCTGACCG CGTTCGGACT TGTCCCGACG GCGCTGGCCG GGGTCGAGGT CACCGAGTTG CTGGACCAGG CGGACGCGCT CGCCGGATCG TTGACCGCGG AGCGGGACAA TCCGGCGCTC GCGCTGGGTG CCGCGCTGGG TGCGGCGGCC ACCGGCGGCC GGGACAAGGT GGCGTTGGTC TCGGACGGCA CCGGAATCGA CGGGCTCGGT GACTGGGCCG AGCAGTTGAT CGCGGAGTCG ACCGGCAAGT CCGGGATCGG CATCCTGCCT GTCGTCGTCG AGTCCCCGAA CGGCCCCGGC ACCAGCGGCG AGGATGTGCT CACCATCAGC TACGGCGGCG CCCTGACCGT CGGAGAGCCC GGCGGCGGCG CACCGACTGT CGGCGAGGCT GGCGGCGGCA CGCCGGACGT GGCGGTCAAC GGGCCGTTGG GGGCGCAGTT CCTCGCCTGG GAGTACGCGA TCGCGATCGC CGGCGTGGTG CTCGGCATCG ACGCGTTCAA CCAGCCGAAC GTCACCGAGA GCAAGGAAAA CACCAACAAG ATCCTGGACT CGGGTGCGCC GACGGAGCAG CCGTCGTTCA CCGAGGGCGC GATCGAGGTA TACGCCCCGG CGGGCGTGCC GAACGACCTG GCCGGCGCGC TGCGCTGGCT GGTCGACAAC CTCGGCGGCG ACGGCTACCT CGCGGTCATG GCCTACCTCG ATCGGATCAC CGACGCCGAC GCGGCCCGAC TACGTCCGAT GTTGGCCGAG GCGGCCGGCC GGCCGGTGAC CTTCGGTTGG GGCCCGCGGT TCCTGCACTC CACCGGGCAA TATCACAAGG GTGGCCCGCA GGTGGGCAGC TTCCTTCAGG TAACGGGTAC GGTCGACGTT GACCTGCCGG TGCCCGGAAA GCCGTACAGC TTCGGGGAGC TGCAGGCGGC GCAGGCCGCC GGCGACCGGC AGGCCTTGGC CGACCGGAAG CGTCCGGTGT TGCGGCTGCA CCTGACCGAC CGGTCCGCGG GTGTGGCCCA GCTGCTGGAG GTGACCGGCG CGCTGCCCAA GCGACGATGA
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Protein sequence | MSELLGQPVE AAAGLTVRGA DAVDRAAPAS IREAVTADDV PGRLVAKDPT LWGPEAEAEA RIRLGWVDTH TRSRELLPQL AELTSELGDL DHVVLCGMGG SSLAPEVIAR TLGRPLTILD TTDPGQVRAA LADRLERTVV VVASKSGSTV ETDSQRRAYW QAFLDAGMSE AEAGRHFVIV TDPGSPLATT AAKMGAFTVL ADPNVGGRFS ALTAFGLVPT ALAGVEVTEL LDQADALAGS LTAERDNPAL ALGAALGAAA TGGRDKVALV SDGTGIDGLG DWAEQLIAES TGKSGIGILP VVVESPNGPG TSGEDVLTIS YGGALTVGEP GGGAPTVGEA GGGTPDVAVN GPLGAQFLAW EYAIAIAGVV LGIDAFNQPN VTESKENTNK ILDSGAPTEQ PSFTEGAIEV YAPAGVPNDL AGALRWLVDN LGGDGYLAVM AYLDRITDAD AARLRPMLAE AAGRPVTFGW GPRFLHSTGQ YHKGGPQVGS FLQVTGTVDV DLPVPGKPYS FGELQAAQAA GDRQALADRK RPVLRLHLTD RSAGVAQLLE VTGALPKRR
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