Gene Sare_3318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3318 
Symbol 
ID5707185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3829644 
End bp3831323 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content72% 
IMG OID641272745 
Productphosphoglucose isomerase (PGI) 
Protein accessionYP_001538112 
Protein GI159038859 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00200112 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCGAGC TTCTCGGGCA GCCCGTCGAG GCCGCTGCCG GACTCACCGT ACGCGGGGCG 
GACGCGGTCG ACCGGGCCGC ACCCGCCTCC ATCAGGGAGG CGGTGACGGC GGACGATGTG
CCGGGCCGGC TCGTCGCGAA GGACCCCACG CTCTGGGGCC CGGAGGCCGA GGCCGAGGCG
CGGATCCGGC TGGGCTGGGT CGACACCCAC ACCCGGAGCC GGGAGTTGCT TCCTCAGCTC
GCCGAGCTGA CCTCGGAGCT GGGCGACCTG GATCACGTGG TGCTGTGTGG GATGGGCGGT
TCGTCGCTGG CCCCGGAGGT GATCGCCCGG ACCCTCGGCC GGCCGCTGAC CATCCTGGAC
ACCACCGACC CGGGTCAGGT CCGGGCGGCG CTGGCCGACC GGCTGGAGCG GACGGTCGTC
GTGGTGGCCA GCAAGTCCGG TTCGACCGTG GAGACCGACA GTCAGCGCCG GGCGTACTGG
CAGGCGTTCC TGGACGCGGG CATGTCCGAG GCGGAGGCGG GGCGACACTT CGTGATCGTC
ACCGACCCGG GCTCGCCACT GGCGACGACC GCCGCCAAGA TGGGAGCGTT CACCGTGTTG
GCCGACCCGA ACGTCGGCGG GCGGTTCTCC GCGCTGACCG CGTTCGGACT TGTCCCGACG
GCGCTGGCCG GGGTCGAGGT CACCGAGTTG CTGGACCAGG CGGACGCGCT CGCCGGATCG
TTGACCGCGG AGCGGGACAA TCCGGCGCTC GCGCTGGGTG CCGCGCTGGG TGCGGCGGCC
ACCGGCGGCC GGGACAAGGT GGCGTTGGTC TCGGACGGCA CCGGAATCGA CGGGCTCGGT
GACTGGGCCG AGCAGTTGAT CGCGGAGTCG ACCGGCAAGT CCGGGATCGG CATCCTGCCT
GTCGTCGTCG AGTCCCCGAA CGGCCCCGGC ACCAGCGGCG AGGATGTGCT CACCATCAGC
TACGGCGGCG CCCTGACCGT CGGAGAGCCC GGCGGCGGCG CACCGACTGT CGGCGAGGCT
GGCGGCGGCA CGCCGGACGT GGCGGTCAAC GGGCCGTTGG GGGCGCAGTT CCTCGCCTGG
GAGTACGCGA TCGCGATCGC CGGCGTGGTG CTCGGCATCG ACGCGTTCAA CCAGCCGAAC
GTCACCGAGA GCAAGGAAAA CACCAACAAG ATCCTGGACT CGGGTGCGCC GACGGAGCAG
CCGTCGTTCA CCGAGGGCGC GATCGAGGTA TACGCCCCGG CGGGCGTGCC GAACGACCTG
GCCGGCGCGC TGCGCTGGCT GGTCGACAAC CTCGGCGGCG ACGGCTACCT CGCGGTCATG
GCCTACCTCG ATCGGATCAC CGACGCCGAC GCGGCCCGAC TACGTCCGAT GTTGGCCGAG
GCGGCCGGCC GGCCGGTGAC CTTCGGTTGG GGCCCGCGGT TCCTGCACTC CACCGGGCAA
TATCACAAGG GTGGCCCGCA GGTGGGCAGC TTCCTTCAGG TAACGGGTAC GGTCGACGTT
GACCTGCCGG TGCCCGGAAA GCCGTACAGC TTCGGGGAGC TGCAGGCGGC GCAGGCCGCC
GGCGACCGGC AGGCCTTGGC CGACCGGAAG CGTCCGGTGT TGCGGCTGCA CCTGACCGAC
CGGTCCGCGG GTGTGGCCCA GCTGCTGGAG GTGACCGGCG CGCTGCCCAA GCGACGATGA
 
Protein sequence
MSELLGQPVE AAAGLTVRGA DAVDRAAPAS IREAVTADDV PGRLVAKDPT LWGPEAEAEA 
RIRLGWVDTH TRSRELLPQL AELTSELGDL DHVVLCGMGG SSLAPEVIAR TLGRPLTILD
TTDPGQVRAA LADRLERTVV VVASKSGSTV ETDSQRRAYW QAFLDAGMSE AEAGRHFVIV
TDPGSPLATT AAKMGAFTVL ADPNVGGRFS ALTAFGLVPT ALAGVEVTEL LDQADALAGS
LTAERDNPAL ALGAALGAAA TGGRDKVALV SDGTGIDGLG DWAEQLIAES TGKSGIGILP
VVVESPNGPG TSGEDVLTIS YGGALTVGEP GGGAPTVGEA GGGTPDVAVN GPLGAQFLAW
EYAIAIAGVV LGIDAFNQPN VTESKENTNK ILDSGAPTEQ PSFTEGAIEV YAPAGVPNDL
AGALRWLVDN LGGDGYLAVM AYLDRITDAD AARLRPMLAE AAGRPVTFGW GPRFLHSTGQ
YHKGGPQVGS FLQVTGTVDV DLPVPGKPYS FGELQAAQAA GDRQALADRK RPVLRLHLTD
RSAGVAQLLE VTGALPKRR